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TranscriptomicsCathepsin K Contributes to Cavitation and Collagen Turnover in Pulmonary Tuberculosis
Cavitation in tuberculosis (TB) enables highly efficient person-to-person aerosol transmission. Currently, a number of hypotheses exist regarding the mechanisms underlying this process. To explore this process, we undertook an unbiased next-generation transcriptional analysis of samples from cavity ...
ORGANISM(S): Oryctolagus cuniculus 
2015-11-03 | E-GEOD-68206 | biostudies-arrayexpress
TranscriptomicsGenes induced by HERV-K virus retroviral envelop
The HERV-K(HML2) family is a group of elements of retroviral origin that are present in the human genome. They are silenced in most normal tissues, but are induced in a number of human cancers. In order to assess the relevance of their expression in these pathologies, the consequences of ectopic exp...
ORGANISM(S): Homo sapiens 
2017-06-17 | E-MTAB-5509 | biostudies-arrayexpress
TranscriptomicsEscherichia coli K-12: 5% isooctane treatment at four time points
Transcripitonal profiling of Escherichia coli K-12 BW25113 comparing cells with isooctane treatment at time point of 0, 10, 30 and 60 min with two biological replicates One-condition experiment, cells with isooctane treatment at incubation time of 0, 10, 30 and 60 min, respectively
ORGANISM(S): Escherichia coli K-12 
2014-09-13 | E-GEOD-32131 | biostudies-arrayexpress
TranscriptomicsKlebsiella pneumoniae: WT vs. Hfq mutant
Transcriptional profiling of K. pneumoniae comparing the wild type strain (S5) with a hfq deletion mutant (H0201). Goal was to determine the effects of Hfq absence on global K. pneumoniae gene expression. WT vs. Hfq mutant. Eight replicates for each ORF presented in the 44K array.
ORGANISM(S): Klebsiella pneumoniae 
2013-01-11 | E-GEOD-29448 | biostudies-arrayexpress
TranscriptomicsAn alternative, arginase-independent pathway for arginine metabolism in Kluyveromyces lactis involves guanidinobutyrase as a key enzyme
Most available knowledge on fungal arginine metabolism is derived from studies on Saccharomyces cerevisiae, in which arginine catabolism is initiated by releasing urea via the arginase reaction. Orthologs of the S. cerevisiae genes encoding the first three enzymes in the arginase pathway were cloned...
ORGANISM(S): Kluyveromyces lactis 
2014-07-16 | E-GEOD-56060 | biostudies-arrayexpress
TranscriptomicsEscherichia coli K-12: 1% hydrogen peroxide treatment under anaerobic condition
Transcripitonal profiling of Escherichia coli K-12 W3110 comparing cells with and without hydrogen peroxide treatment, two biological replicates each One-condition experiment, cells with or without hydrogen peroxide treatment for 10min
ORGANISM(S): Escherichia coli 
2014-01-01 | E-GEOD-38185 | biostudies-arrayexpress
UnknownSelenoprotein K knockout mice exhibit deficient calcium flux in immune cells and impaired immune responses.
Not available
S-EPMC3088479 | biostudies-literature
Unknownk-Means NANI: An Improved Clustering Algorithm for Molecular Dynamics Simulations.
Not available
S-EPMC11541788 | biostudies-literature
Unknownk-Means NANI: an improved clustering algorithm for Molecular Dynamics simulations.
Not available
S-EPMC10942464 | biostudies-literature
TranscriptomicsEscherichia coli K-12: luxS mutant LW12 vs. wild type W3110
Transcripitonal profiling of Escherichia coli K-12 comparing luxS mutant LW12 with wild type W3110 One-condition experiment, luxS mutant LW12 vs. wild type W3110
ORGANISM(S): Escherichia coli 
2010-11-11 | E-GEOD-20606 | biostudies-arrayexpress
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