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ProteomicsYersinia enterocolitica SOR17 - The RNA chaperone Hfq impacts growth, metabolism and production of virulence factors in Yersinia enterocolitica
We work with the bacterium Yersinia enterocolitica, a gastrointestinal pathogen. In this study we characterized a bacterial mutant strain called SOR17. We compared the protein extracts of SOR17 with that of the parental strain JB580v. Bacteria were grown in triplicate for 5 h at 37°C, and followi...
ORGANISM(S): Yersinia enterocolitica Bacteria 
2014-04-16 | PXD000475 | Pride
Yersinia Enterocolitica Sor17 
UnknownLegionella pneumophila type II protein secretion promotes virulence in the A/J mouse model of Legionnaires' disease pneumonia.
Not available
S-EPMC344012 | biostudies-literature
Transcriptomics[E-MTAB-407] GENCODE PCR-Seq Batch II
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification followed by sequencing. This is batch II, based on annotation from April 2009. ArrayExpr...
ORGANISM(S): Homo sapiens 
2010-12-04 | GSE25711 | GEO
Transcriptomics[E-MTAB-533] GENCODE Targeted Sequencing Batch III
As part of the RNASeq Genome Annotation Assessment Project (RGASP) selected novel gene model predictions were analysed with RT-PCR-Seq. ArrayExpress Release Date: 2011-03-01 Publication Title: GENCODE: producing a reference annotation for ENCODE Publication Author List: Harrow J, Denoeud F, Frankish...
ORGANISM(S): Homo sapiens Caenorhabditis elegans 
2011-07-14 | GSE30612 | GEO
Transcriptomics[E-MTAB-737] GENCODE PCR-Seq Batch V
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification followed by sequencing. This is batch V, based on annotations from Gencode 6 (November20...
ORGANISM(S): Homo sapiens 
2012-01-04 | GSE34820 | GEO
Transcriptomics[E-MTAB-935] GENCODE PCR-Seq Batch VII
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification followed by sequencing. This is batch VII, which targets annotations from Gencode 8 (Mar...
ORGANISM(S): Homo sapiens 
2012-04-25 | GSE37592 | GEO
Transcriptomics[E-MTAB-612] GENCODE PCR-Seq Batch I
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification followed by sequencing. This is the RNASeq part of batch I, based on annotation from Jul...
ORGANISM(S): Homo sapiens 
2011-07-14 | GSE30619 | GEO
Transcriptomics[E-MTAB-831] GENCODE PCR-Seq Batch VI
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification followed by sequencing. This is batch VI, which targets annotations from Gencode 6 (Nove...
ORGANISM(S): Homo sapiens 
2012-01-04 | GSE34821 | GEO
Transcriptomics[E-MTAB-684] GENCODE PCR-Seq Batch IV
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification followed by sequencing. This is batch IV, based on chromosome 3, 4 and 5 annotations fro...
ORGANISM(S): Homo sapiens 
2012-01-04 | GSE34797 | GEO
UnknownLegionella pneumophila type II secretion dampens the cytokine response of infected macrophages and epithelia.
Not available
S-EPMC3088156 | biostudies-literature
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