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TranscriptomicsChromatin immunoprecipitation to identify H-NS and RNA polymerase (beta-subunit) binding sites on the Salmonella typhimurium chromosome
Chromatin immunoprecipitation experiment to identify H-NS and RNA polymerase (beta-subunit) binding sites on the Salmonella Typhimurium chromosome
ORGANISM(S): Salmonella typhimurium 
2006-08-17 | E-MEXP-806 | biostudies-arrayexpress
TranscriptomicsSalmonella wild type and mutant sdiA in LB and 2mM indole
Transcriptional profiling of Salmonella Typhimurium SL1344 wild type and deletion of the sdiA regulator-encoding gene grown to OD600=1 in LB alone or in LB supplemented with 2mM indole. The goal is to determine Salmonella response to indole and to define the SdiA-regulated genes in these conditions....
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 
2013-01-30 | E-GEOD-36805 | biostudies-arrayexpress
TranscriptomicsSalmonella wild type in LB, 2mM indole until OD1 and 2mM indole for 15 minutes
Transcriptional profiling of Salmonella Typhimurium SL1344 wild type grown to OD600=1 in LB alone or in LB supplemented with 2mM Indole, or with 2mM indole for 15 min (called shock). The goal is to determine Salmonella response to indole at different time points. Different conditions were tested. Th...
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 
2013-01-30 | E-GEOD-39760 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of Paracoccus denitrificans during Cu-limitation
Transcriptional profiling of Paracoccus denitrificans PD1222 wild type grown to mid-exponential phase in minimal media with either 13 uM (Cu-H) or 0.5 uM (Cu-L) Cu regimes. The goal was to define the effects of Cu-limitation on denitrification genes Two growth conditions, three biological replicates...
ORGANISM(S): Paracoccus denitrificans PD1222 
2013-11-18 | E-GEOD-48577 | biostudies-arrayexpress
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