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MetabolomicsLipid mediators of inflammation in BALF 3-11 days after infection with influenza
Bioactive lipid mediators play a crucial role in the induction and resolution of inflammation. To elucidate their involvement during influenza infection, liquid chromatography/mass spectrometry lipidomic profiling of 141 lipid species was performed on a mouse influenza model using two viruses of sig...
2013-05-30 | MTBLS33 | MetaboLights
TranscriptomicsComparative genomic hybridization of Agrobacterium tumefaciens strains on tiling arrays covering the genome of strain C58
Comparative genomic hybridizations obtained with an original Agrobacterium tumefaciens strain C58 genome-based micro-array were used to detect the presence or absence of genes homologous to those of strain C58 in 25 agrobacterial strains. These strains included six other members of genomovar G8, on...
ORGANISM(S): Agrobacterium larrymoorei 
2011-09-08 | E-MTAB-558 | biostudies-arrayexpress
MetabolomicsLipid mediators of inflammation in BALF 6-19 days after infection with influenza
In this study broncho-alveolar lavage fluid (BALF) from mice infected with influenza A virus, PR8 (280 PFU) was analyzed for lipidomic host response in comparison with the mock infected animals. Time Points: 6, 9, 11, 13 and 19 days post infection, done in 8-10 replicates.)
2013-05-30 | MTBLS32 | MetaboLights
MetabolomicsLipid mediators of inflammation in BALF 3-13 days after infection with influenza
In this study broncho-alveolar lavage fluid (BALF) from mice infected with influenza A virus, PR8 (200 PFU) or X31 (200,000 PFU) was analyzed for lipidomic host response in comparison with the mock infected animals. Time Points: 3, 5, 6, 7, 9, 10 and 13 days post infection.)
2013-05-30 | MTBLS34 | MetaboLights
MetabolomicsLipid mediators of inflammation in BALF 3-19 days after infection with influenza
In this study broncho-alveolar lavage fluid (BALF) from mice infected with influenza A virus, PR8 (200 PFU and 200,000 PFU), X31 (2000,000 PFU) was analyzed for lipidomic host response in comparison with the mock infected animals. Time Points: 3, 5, 7, 9, 11, 13, 19 days post infection, done in 8-10...
2013-05-09 | MTBLS31 | MetaboLights
TranscriptomicsTranscription profiling of wild type and dbr1-delta strains of Candida albicans grown under standard or various mixed conditions
Probes flanking all predicted Candida albicans ORFs are used to detect intron sequences that accumulate in a debranchase (DBR1) mutant. We synthesized cDNA from RNA from both wild-type and dbr1-delta mutant strains grown under standard (YEPD) or various mixed conditions, labeled the two populations...
ORGANISM(S): Candida albicans 
2007-02-22 | E-MEXP-1003 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of blackcurrant (Ribes nigrum cv Ben Hope) bud tissue during dormancy and bud-break.
Transcriptional analysis of staged leaf bud tissue during dormancy and bud-break in blackcurrant using SCRI custom Ribes 4k arrays
ORGANISM(S): Ribes nigrum 
2010-05-01 | E-TABM-807 | biostudies-arrayexpress
TranscriptomicsTranscriptional profiling of six normal Angus tissues
Transcriptional profiling of six bovine tissues (small intestine, spleen, liver, adrenal gland, anterior pituitary, and thymus). Samples collected from each of 6 Angus steers at 14 months of age. Experiment was duplicated at two locations to measure reproducability of results. Six tissues, six biolo...
ORGANISM(S): Bos taurus 
2010-11-01 | E-GEOD-23837 | biostudies-arrayexpress
TranscriptomicsMaternal influences on the transmission of leukocyte gene expression profiles in population samples (mother and child)
This study contrasts the expression profiles of peripheral blood leukocytes from third trimester pregnant mothers, with cord blood leukocytes from their newborn children. It is a companion to (GSE21311). After normalization for RNA integrity, major principal components of the variation were found ...
ORGANISM(S): Homo sapiens 
2011-01-01 | E-GEOD-21342 | biostudies-arrayexpress
TranscriptomicsMaternal influences on the transmission of leukocyte gene expression profiles in population samples (Red Cross Donors)
This is a companion study to (GSE21342). Peripheral blood leukocyte samples were obtained with consent from 100 red cross blood donors sampled cross-sectionally across the city of Brisbane, Australia. After correction for RNA integrity values, individuals fall into major profiles of expression var...
ORGANISM(S): Homo sapiens 
2011-01-01 | E-GEOD-21311 | biostudies-arrayexpress
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