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TranscriptomicsA basic helix-loop-helix transcription factors network mediates the brassinosteroid signal
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Arabidopsis thaliana 
2014-03-05 | E-GEOD-51121 | biostudies-arrayexpress
GenomicsA basic helix-loop-helix transcription factors network mediates the brassinosteroid signal [ChIP-seq]
To investigate the genome-wide occupancies of INCREASED LEAF INCLINATION1 (ILI1)-BINDING bHLH-1 (IBH1) (At2g43060), IBH1 ChIP analysis followed by direct sequencing (ChIP-Seq) on the p35S::IBH1-GFP (IBH1OE) line and a control line p35S::GFP (GFP OE) were conducted. Antibodies against GFP in the GFP...
ORGANISM(S): Arabidopsis thaliana 
2014-03-05 | E-GEOD-51120 | biostudies-arrayexpress
TranscriptomicsA basic helix-loop-helix transcription factors network mediates the brassinosteroid signal [RNA-seq]
To understand how atypical bHLH, INCREASED LEAF INCLINATION1 (ILI1)-BINDING bHLH-1 (IBH1) (At2g43060), and close homologue, IBH1-like1 (IBL1) (At4g30410), interact to regulate cell elongation, genome-wide RNA-Seq expression analyses of IBH1 and IBL1 gain-(IBH1OE, IBL1OE) and loss-of-function (ibh1 (...
ORGANISM(S): Arabidopsis thaliana 
2014-03-05 | E-GEOD-51119 | biostudies-arrayexpress
ProteomicsMapping the protein interaction network of adaptor protein complex in Arabidopsis identifies P34 as a common stability regulator
Adaptor protein (AP) complexes are evolutionarily conserved vesicle transport regulators that recruit coat proteins, membrane cargos and coated vesicle accessory proteins. Since in plants endocytic and post-Golgi trafficking intersect at the trans-Golgi network, unique mechanisms for sorting cargos ...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2023-12-07 | PXD035454 | Pride
Ap-ms Arabidopsis Turboid Proximity labeling Adaptor complex Tap Interaction network 
ProteomicsProteome-wide cellular thermal shift assay reveals novel crosstalk between brassinosteroid and auxin signaling
Despite the growing interest in using chemical genetics in plant research, small-molecule target identification remains a major challenge. The cellular thermal shift assay coupled with high-resolution massspectrometry (CETSA MS) that monitors changes in the thermal stability of proteins caused by th...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-04-04 | PXD030309 | Pride
Brassinosteroids Auxin Chemical genetics Cellular thermal shift assay 
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