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TranscriptomicsResponse of tobacco cells to Glucan elicitor
We have previously reported that the responses of tobacco tissues treated with AaGlucan are similar to those for laminarin [1]. To better understand the overall responses and signaling pathways in tobacco, we have identified here AaGlucan and laminarin early response genes, using a custom 16K BY-2 m...
ORGANISM(S): Nicotiana tabacum 
2007-10-16 | E-GEOD-6948 | biostudies-arrayexpress
TranscriptomicsDe novo Assembly and Characterization of Swertia japonica Transcriptome for the Identification of Candidate Genes Involved in the Biosynthesis of Therapeutic Metabolites
Here, we performed deep transcriptome sequencing for the aerial-tissues and the roots of S. japonica, generating over 2 billion raw reads with an average length of 101 nt by using an Illumina paired-end sequencing by HiSeq2000 platform. Using a combined approach of three popular assemblers, de novo ...
ORGANISM(S): Swertia japonica 
2016-07-01 | E-GEOD-80057 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis roots from slim1 and the parental line grown +/-S condition
Plants utilize soil sulfate for production of sulfur-containing amino acids that serve as essential dietary sulfur sources for animals. Despite the global nutritional significance of this fundamental metabolic process in nature, transcription factors regulating the plant sulfur assimilation pathways...
ORGANISM(S): Arabidopsis thaliana 
2008-06-13 | E-GEOD-4455 | biostudies-arrayexpress
no omics definedTranscription profiling of human mesenchymal stem cells transfected with adenoviruses carrying the SOX trio or LacZ control to identify target molecules
The aim of the experiment is to identify target molecules of the SOX trio (SOX9, SOX5 and SOX6). hMSC were transfected with the adenoviruses carrying the SOX trio or the LacZ-control, and total RNA was isolated after 2 weeks of culture.
ORGANISM(S): Homo sapiens 
2007-04-01 | E-MEXP-960 | biostudies-arrayexpress
ProteomicsPacific Ocean metaproteomics, METZYME KM1128
Global metaproteomic analyses of microbial biomass from the upper water column of the Central Pacific Ocean. This dataset was used as a discovery dataset to identify peptide biomarkers for cyanobacterial populations for use in targeted metaproteomic calibrated multiple reaction monitoring (MRM) anal...
ORGANISM(S): environmental samples 
2019-02-12 | PXD009712 | Pride
Metaproteomics proteomics oceanography oceanic proteome 
UnknownS-genotype identification based on allele-specific PCR in Japanese pear.
Not available
S-EPMC4482170 | biostudies-literature
ProteomicsPacific Ocean metaproteomics, METZYME KM1128
Global metaproteomic analyses of microbial biomass from the upper water column of the Central Pacific Ocean. This dataset was used as a discovery dataset to identify peptide biomarkers for cyanobacterial populations for use in targeted metaproteomic calibrated multiple reaction monitoring (MRM) anal...
ORGANISM(S): Environmental Samples (ncbitaxon:318178) 
2021-11-05 | MSV000088323 | MassIVE
TranscriptomicsA mutation of RNA polymerase β’ subunit (RpoC) converts heterogeneously vancomycin-intermediate S. aureus (hVISA) into ‘slow-VISA’ (sVISA)
Various mutations in the rpoB gene, which encodes the RNA polymerase beta subunit, are associated with increased vancomycin (VAN) resistance in vancomycin-intermediate S. aureus (VISA) and hetero-VISA (hVISA) strains. We reported that rpoB mutations are also linked to the expression of the recently ...
ORGANISM(S): Staphylococcus aureus 
2015-05-08 | E-GEOD-65338 | biostudies-arrayexpress
UnknownDevelopment of reverse genetics system for Guanarito virus: substitution of E1497K in the L protein of Guanarito virus S-26764 strain changes plaque phenotype and growth kinetics.
Not available
S-EPMC10878084 | biostudies-literature
UnknownMetal ions from S-PRG filler have the potential to prevent periodontal disease.
Not available
S-EPMC5839258 | biostudies-literature
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