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TranscriptomicsTranscriptional profiling of E. coli K-12 and E. coli O157 (Sakai) following heat shock at 45 degree celsius
Escherichia coli O157 presents a number of specific problems in terms of food safety and public health. It has been found that E. coli O157 is more resistant to a number of the stresses encountered during food production such as heat, pH and osmotic shock. This greater resistance is thought to contr...
ORGANISM(S): Escherichia coli 
2018-03-20 | E-MTAB-5912 | biostudies-arrayexpress
Proteomics2D-LC/MS/MS analysis of Escherichia coli during exposure to abrupt downshifts in temperature and water activity
2D-LC/MS/MS analysis was used to examine time-dependent changes in proteome of E. coli O157:H7 strain Sakai upon abrupt downshifts from 35°C aw 0.993 to 14°C aw 0.967. Bacterial cells were harvested before abrupt downshifts in both temperature and aw (i.e. control), or at 0 (i.e. immediately after t...
ORGANISM(S): Escherichia coli 
2016-09-29 | PXD004803 | Pride
Cold temperature 2d-lc/ms/ms Water activity stress E. coli 
GenomicsEscherichia coli K-12
E. coli K-12 hha hns: pCA24N-hnsK57N vs pCA24N-hns biofilm
PRJNA120091 | ENA
TranscriptomicsOxidative stress in E. coli K-12 and O157
Escherichia coli O157 presents a number of specific problems in terms of food safety and public health. It has been found that E. coli O157 is more resistant to a number of the stresses encountered during food production such as heat, pH and osmotic shock. This greater resistance is thought to contr...
ORGANISM(S): Escherichia coli 
2015-02-22 | E-GEOD-36130 | biostudies-arrayexpress
UnknownActivation of the long terminal repeat of human endogenous retrovirus K by melanoma-specific transcription factor MITF-M.
Not available
S-EPMC3223611 | biostudies-literature
TranscriptomicsOxidative stress in E. coli K-12 and O157
Escherichia coli O157 presents a number of specific problems in terms of food safety and public health. It has been found that E. coli O157 is more resistant to a number of the stresses encountered during food production such as heat, pH and osmotic shock. This greater resistance is thought to contr...
ORGANISM(S): Escherichia coli 
2015-02-22 | GSE36130 | GEO
TranscriptomicsTranscription profiling of E. coli K-12 and O157:H7 during exposure to acetic, lactic, and hydrochloric acid at pH 5.5
The foodborne pathogen Escherichia coli O157:H7 is commonly exposed to organic acid in processed and preserved foods, allowing adaptation and the development of tolerance to pH levels otherwise lethal. Since little is known about the molecular basis of adaptation of E. coli to organic acids, we stud...
ORGANISM(S): Escherichia coli 
2010-10-08 | E-TABM-912 | biostudies-arrayexpress
TranscriptomicsEscherichia coli K-12: 5% isooctane treatment at four time points
Transcripitonal profiling of Escherichia coli K-12 BW25113 comparing cells with isooctane treatment at time point of 0, 10, 30 and 60 min with two biological replicates
ORGANISM(S): Escherichia coli str. K-12 substr. MG1655 Escherichia coli K-12 Escherichia coli O157:H7 str. EDL933 Escherichia coli CFT073 Escherichia coli O157:H7 str. Sakai 
2014-09-13 | GSE32131 | GEO
TranscriptomicsEscherichia coli K-12: 1% hydrogen peroxide treatment under anaerobic condition
Transcripitonal profiling of Escherichia coli K-12 W3110 comparing cells with and without hydrogen peroxide treatment, two biological replicates each
ORGANISM(S): Escherichia coli Escherichia coli O157:H7 str. EDL933 Escherichia coli str. K-12 substr. MG1655 Escherichia coli CFT073 Escherichia coli O157:H7 str. Sakai 
2014-01-01 | GSE38185 | GEO
GenomicsE. coli O157:H7 phage type 21/28 & 32 CGH analysis
Six isolates of PT21/28 and six of PT32 were analysed by CGH using UBECarray3 microarrays (containing probes for E. coli K-12 str. MG1655 and O157:H7 str. EDL933 and Sakai) to define genotypic differences between phage types. gDNA from E.coli O157 str. Sakai was hybridised to all arrays to provide a...
ORGANISM(S): Escherichia coli O157:H7 Escherichia coli Escherichia coli O157:H7 str. Sakai 
2012-04-21 | GSE28838 | GEO
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