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TranscriptomicsGene expression data in the retina in HIV positive and HIV negative eyes
To examine the gene expression data in the retina in HIV positive and HIV negative autopsy eyes we used a microarray approach with the HumanHT-12 v4 Expression BeadChip.



Retinal punches were made for the following regions



CWS = cotton wool spot

IRH = intra-retina...
ORGANISM(S): Homo sapiens 
2013-09-20 | E-MEXP-3757 | biostudies-arrayexpress
TranscriptomicsGene expression data in retinal punches from posterior poles in HIV positive and HIV negative autopsy eyes
To examine the gene expression data in retinal punches from posterior poles in HIV positive (PP+) and HIV negative (PP-) autopsy eyes we used a microarray approach with the HumanHT-12 v4 Expression BeadChip
ORGANISM(S): Homo sapiens 
2013-09-01 | E-MEXP-3758 | biostudies-arrayexpress
TranscriptomicsImage based identification and targeting of cancer stem cells in pancreatic adenocarcinoma
Pancreatic intraepithelial neoplasia (PanIN) is a premalignant lesion that can progress to pancreatic ductal adenocarcinoma, a highly lethal malignancy marked by its late stage at clinical presentation and profound drug resistance. Here we developed novel fluorescent reporter mice that show that the...
ORGANISM(S): Mus musculus 
2016-06-15 | E-GEOD-73312 | biostudies-arrayexpress
TranscriptomicsImage based identification and targeting of cancer stem cells in pancreatic adenocarcinoma (PDAC)
Purpose: The goals of this study were to identify quantitative gene expression differences between wild type, Musashi1 null, Msuashi2 null and Musashi1/Musashi2 null MIAPaCa2 pancreatic cancer cells mRNA profiles of MIA PaCa-2 cancer cells were generated by deep sequencing, in triplicate, using Ill...
ORGANISM(S): Homo sapiens 
2016-06-15 | E-GEOD-75797 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse macrophage responses to all-trans retinoic acid between wild type and NCoR-/- mice
Comparison of mouse macrophage responses to all-trans retinoic acid between wild-type and NCoR-/- mice.
ORGANISM(S): Mus musculus 
2006-11-06 | E-MEXP-37 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse macrophage responses to lipopolysaccharide (LPS) and 12-o-tetradecanoylphorbol-13-acetate (TPA) in wild type and NcoR-/- mice
Comparison of mouse macrophage responses to lipopolysaccharide (LPS) and 12-o-tetradecanoylphorbol-13-acetate (TPA) between wild-type and NcoR-/- mice.
ORGANISM(S): Mus musculus 
2006-11-06 | E-MEXP-38 | biostudies-arrayexpress
TranscriptomicsA Gpr120 Selective Agonist Improves Insulin Resistance and Chronic Inflammation
We report that a high affinity, selective, small molecule Gpr120 agonist (cpdA), exerts potent anti-inflammatory effects on macrophages in vitro, and in obese mice in vivo. Gpr120 agonist treatment of high fat diet (HFD)/obese mice causes improved glucose tolerance, decreased hyperinsulinemia, incre...
ORGANISM(S): Mus musculus 
2014-06-07 | E-GEOD-58282 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of mouse wild type and Fibroblast specific protein 1 expressing liver
The aim of this study was to investigate FSP1 in human and experimental liver disease, and to characterize FSP1-positive cells. Results: FSP1-positive cells are increased in human and experimental liver diseases including liver cancer but do not synthesize type I collagen or express other classical ...
ORGANISM(S): Mus musculus 
2010-12-14 | E-MTAB-287 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse B lymphocytes after thapsigargin-stimulated ER stress for 8 and 24 hours to elucidate factors that influence T cell priming
Time course data from thapsigargin-stimulated ER stress for 8 and 24 hours, in order to elucidate factors that influence T cell priming.
ORGANISM(S): Mus musculus 
2008-04-16 | E-TABM-240 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human JY cells treated with Trichostatin A (TSA)
Short- and long-interval response of JY cells treated with Trichostatin A (TSA), used in gene pathway analysis.

Please note that the "Target IDs" used in the user submitted data files have been mapped to Illumina Probe_Ids (as recommended by Illumina) and this mapping is not 1 to 1. Original...
ORGANISM(S): Homo sapiens 
2009-07-08 | E-TABM-356 | biostudies-arrayexpress
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