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TranscriptomicsGene expression of ultra violet irradiation of silk worm Bombyx mori larvae
3 day of fifth instar larvae were treated with ultra-violet (UV) rays using UVL-56 (1350?W/cm2, UVP) for 6 and 12 hours (29.2 and 58.32 J/cm2). Since, larvae of each group rare on artificial diet for 24 hour and dissected fatbody. We examined gene expression profile in these groups. Gene expression ...
ORGANISM(S): Bombyx mori 
2015-02-26 | E-GEOD-55816 | biostudies-arrayexpress
Genomicsena-DATASET-UT-Ped-15-12-2014-06:44:14:477-357 - samples
Whole-exome sequencing in 16 RMS cases Whole-transcriptome sequencing in 8 RMS cases
EGAD00001001105 | EGA
Genomicsena-DATASET-CGP-UT-20-03-2015-01:02:52:882-534 - samples
Description not provided
EGAD00001001302 | EGA
GenomicsWhole-exome sequencing of Fanconi anemia
We performed whole-exome sequencing of two Fanconi anemia patients without mutation of known FA genes, and identified a novel FA gene FANCT.
EGAS00001001103 | EGA
GenomicsDepartment of Pathology and Tumor Biology, Kyoto University Data Access Committee
Data Access Committee EGAC00001000150
EGAC00001000150 | EGA
GenomicsIntegrated genetic and epigenetic analysis defines novel molecular clusters in rhabdomyosarcoma
Rhabdomyosarcoma (RMS) is the most common soft tissue sarcoma in childhood. To unravel the genetic/epigenetic basis of RMS, we studied 60 RMS cases using whole exome/transcriptome sequencing, copy number (CN) profiling, and DNA methylome analysis. Based on DNA methylation patterns, RMS was clustered...
EGAS00001000884 | EGA
TranscriptomicsTranscription profiling by array of human colon cancer stem cells derived from human colon cancer line cell, SW480
Cancer stem-like cells are defined as small population of cancer cells which has, higher tumor-initiating ability, self-renewing ability and differentiation ability. In this experiment, transcription profile of cancer stem-like cells derived from human colon cancer line cell SW480 was investigated....
ORGANISM(S): Homo sapiens 
2015-05-31 | E-MTAB-2605 | biostudies-arrayexpress
ProteomicsMudPIT analyses of the proteins co-purified with the Interactor of Little Elongation Complex ELL subunit 1 (FLAG-ICE1), WT MED26, and D2G8 NTD-mutant MED26, affinity-purified from HEK293T cell lines
Protein Complexes Purification: We generated 293FRT cell lines that stably express FLAG-tagged ICE1 (Interactor of Little Elongation Complex ELL subunit 1; KIAA0947). We extracted nuclear proteins in the presence of Benzonase to digest nucleic acids, including both DNA and RNA, and purified the lit...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-02-20 | MSV000083465 | MassIVE
GenomicsRMS_Infinium450K
Infinium 450K in Rhabdomyosarcoma
EGAD00010000897 | EGA
GenomicsDepartment of Pediatrics, The University of Tokyo Data Access Committee
Data Access Committee EGAC00001000207
EGAC00001000207 | EGA
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