Scherer J J - OmicsDI

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Unknown (979)
Transcriptomics (39)
Proteomics (25)
Genomics (15)
Metabolomics (2)

Organisms

Homo sapiens (48)
Mus musculus (12)
Arabidopsis thaliana (3)
Bombus terrestris (2)
Drosophila mojavensis (1)
Macaca mulatta (1)
Salmonella enterica subsp. enterica serovar Typhimurium (1)
Caenorhabditis elegans (1)
Drosophila melanogaster (1)
Rattus norvegicus (1)

Repository

biostudies-arrayexpress (39)
pride (22)
EGA (15)
MassIVE (2)
MetaboLights (2)
iProX (1)

Tissue

Kidney (4)
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Venom (1)

Disease

Rheumatoid arthritis (2)
Normal (1)
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Essential hypertension (1)
Long COVID (1)
Renal clear cell carcinoma (1)

Technology Type

Mass Spectrometry (22)
Shotgun proteomics (11)
Bottom-up proteomics (8)
Data-independent acquisition (5)
Mass spectrometry (2)
Affinity purification coupled with mass spectrometry proteomics (2)
AB SOLiD System 3.0 (1)
COMPLETE_GENOMICS, Complete Genomics (1)
Top-down proteomics (1)

Instrument Platform

Illumina Genome Analyzer (2)
Illumina Genome Analyzer II (2)
HPC services from the University of Granada (http://alhambra.ugr.es) (1)
Illumina HiSeq 2000 (1)
LTQ Orbitrap (1)
LTQ Orbitrap Elite (1)
Q Exactive Plus (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2013 (14)
2010 (11)
2023 (5)
2024 (5)
2025 (5)
2012 (4)
2020 (3)
2006 (3)
2019 (3)
2014 (2)
2009 (2)
2026 (2)
2015 (2)
2016 (1)
2008 (1)
2004 (1)
2021 (1)
2022 (1)

CHEBI ID

CHEBI:10001 (1)
CHEBI:100147 (1)
CHEBI:10032 (1)
CHEBI:10037 (1)
CHEBI:10072 (1)
CHEBI:10111 (1)
CHEBI:10136 (1)
CHEBI:102216 (1)
CHEBI:10353 (1)
CHEBI:107658 (1)
CHEBI:10782 (1)
CHEBI:1135 (1)
CHEBI:113542 (1)
CHEBI:115196 (1)
CHEBI:122 (1)
CHEBI:131427 (1)
CHEBI:131428 (1)
CHEBI:131430 (1)
CHEBI:131762 (1)
CHEBI:131887 (1)
CHEBI:131991 (1)
CHEBI:132004 (1)
CHEBI:132007 (1)
CHEBI:132033 (1)
CHEBI:132627 (1)
CHEBI:132650 (1)
CHEBI:132789 (1)
CHEBI:133094 (1)
CHEBI:133206 (1)
CHEBI:133220 (1)

Metabolite Name

((+-))5,6-DHET (1)
(+)-12-hydroxy-9Z-hexadecenoic acid (1)
(+)-Praeruptorin A (1)
(+-)-Carbovir (1)
(+/-)18-HEPE (1)
(-)-Epiafzelechin (1)
(-)-Fustin (1)
(17beta)-17-Hydroxyandrostan-3-one (1)
(1R,4aS,5R,8aS)-5-(5-hydroxy-3-methylpentyl)-1,4a-dimethyl-6-methylidene-3,4,5,7,8,8a-hexahydro-2H-naphthalene-1-carboxylic acid (1)
(2R)-2-[(2R,5S)-5-[(2S)-2-hydroxybutyl]oxolan-2-yl]propanoic acid (1)
(2R,3Z)-Phycocyanobilin (1)
(2R,5S,9R,12R)-13,13-dimethyl-7-oxatetracyclo[7.5.0.01,5.02,12]tetradecane-4,8-dione (1)
(2S)-2-phenyl-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3-dihydrochromen-4-one (1)
(3,6,9-trimethylidene-2-oxo-3a,4,5,6a,7,8,9a,9b-octahydroazuleno[4,5-b]furan-8-yl) acetate (1)
(4E,8E,10E-d18:3)sphingosine (1)
(4E,d14:1) sphingosine (1)
(7E,9E,13E)-5,6,15-trihydroxyicosa-7,9,13-trien-11-ynoic acid (1)
(9R,13R)-1a,1b-dihomo-jasmonic acid (1)
(9Z,11S,16S)-1-Acetoxy-9,17-octadecadiene-12,14-diyne-11,16-diol (1)
(E,E,E)-Geranylgeranyl alcohol (1)
(R)-Meranzin (1)
(S)-(-)-Perillyl alcohol (1)
(S)-Pterosin P (1)
(S)-beta-Methylindolepyruvate (1)
1,11-Undecanedicarboxylic acid (1)
1,2,3-Trihydroxybenzene (1)
1,2-dihydroxyheptadec-16-yn-4-yl acetate (1)
1,3,6-Trihydroxy-8-n-butylanthraquinone (1)
1,3,8-trihydroxy-6-methylanthra-9,10-quinone (1)
1-Hydroxyisoquinoline (1)

Study type

Transcription profiling by array (20)
Comparative genomic hybridization by array (10)
RNA-seq of coding RNA (4)
Unknown experiment type (2)
Genotyping by array (2)
Animal - One-color microarray (1)

Release Date

2025 (110)
2022 (101)
2021 (99)
2023 (96)
2020 (72)
2024 (72)
2019 (56)
2017 (56)
2018 (49)
2014 (44)
2016 (38)
2013 (37)
2015 (36)
2012 (32)
2010 (27)
2026 (16)
2011 (16)
2006 (13)
2009 (12)
2008 (10)
2007 (9)
2003 (5)
2005 (4)
2004 (3)
2001 (2)
2000 (1)
1999 (1)
1998 (1)

Lab affiliation

Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA. (2)
Division of Medical Inflammation Research, Dept. Medical Biochemistry and Biophysics, Karolinska Institute, Sweden (2)
Molecular Genetics, RPTU Kaiserslautern (2)
Biomolecular Mass Spectrometry and Proteomics,Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, Utrecht 3584 CH, The Netherlands Netherlands Proteomics Center, Padualaan 8, Utrecht 3584 CH, the Netherlands (1)
Biozentrum der LMU München Pflanzenwissenschaften Großhaderner Str. 2-4 82152 Planegg-Martinsried Germany (1)
Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Germany (1)
Department of Biochemistry and Microbiology, L-Probe Lab Ghent University (1)
Department of Biochemisty, The University of Western Ontario, London,Canada (1)
Department of Clinical Medicine, University of Bergen, Norway (1)
Department of biochemistry, UT Southwestern Medical Center (1)
Dr. Gerhard Mittler Group Leader Proteomics Unit MPI Immunobiology and Epigenetics Stuebeweg 51 D-79108 Freiburg, Germany Phone: +49 (0)761 5108 712 (1)
Head, Ubiquitin Signalling Division The Walter and Eliza Hall Institute of Medical Research 1G Royal Parade, Parkville 3052, VIC, Australia Professor, Department of Medical Biology University of Melbourne, 3010 Melbourne, VIC, Australia (1)
Helmholtz diabetes center (1)
Institute of Molecular Biology (IMB) Ackermannweg 4 55128 Mainz (1)
Institute of Pharmaceutical Sciences (IPW), Department of Chemistry and Applied Biosciences (D-CHAB), ETH Zürich, Vladimir-Prelog-Weg 3, 8093, Zürich, Switzerland (1)
Marcel Doerflinger, PhD Division of Infectious Diseases and Immune Defence The Walter and Eliza Hall Institute of Medical Research 1G Royal Parade, 3052 Parkville VIC, Australia (1)
Maynooth University Department of Biology Maynooth University, Maynooth, Co. Kildare, Ireland. (1)
Renal Research Group Department of Clinical Medicine University of Bergen, Norway (1)
UMB, Poland (1)

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Identification of regulators of polyploidization presents therapeutic targetsfor treatment of AMKL

Wen Q, Goldenson B, Silver SJ, Schenone M, Dancik V, Huang Z, Wang LZ, Lewis TA, An WF, Li X, Bray MA, Thiollier C, Diebold L, Gilles L, Vokes MS, Moore CB, Bliss-Moreau M, Verplank L, Tolliday NJ, Mishra R, Vemula S, Shi J, Wei L, Kapur R, Lopez CK, Gerby B, Ballerini P, Pflumio F, Gilliland DG, Go...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2014-01-27 | MSV000078536 | MassIVE

Andersonoplatus, a new, remarkable leaf litter inhabiting genus of Monoplatina (Coleoptera, Chrysomelidae, Galerucinae, Alticini).

Not available

S-EPMC5904521 | biostudies-literature

Biochemical analysis of the human mismatch repair proteins hMutSα MSH2(G674A)-MSH6 and MSH2-MSH6(T1219D).

Not available

S-EPMC3323011 | biostudies-literature

Liver-derived cell lines from cavefish Astyanax mexicanus as an in vitro model for studying metabolic adaptation.

Not available

S-EPMC9203785 | biostudies-literature

Changing provider behaviour to increase nurse visits for obesity in family practice: the 5As Team randomized controlled trial.

Not available

S-EPMC6544504 | biostudies-literature

Impact of the 5As Team study on clinical practice in primary care obesity management: a qualitative study.

Not available

S-EPMC5498321 | biostudies-literature

Sequencing of isolated sperm cells for direct haplotyping of a human genome.

Not available

S-EPMC3638138 | biostudies-literature

Combining crystallography and EPR: crystal and solution structures of the multidomain cochaperone DnaJ.

Not available

S-EPMC3727329 | biostudies-literature

What work is required to implement and sustain the National Surgical Quality Improvement Program (NSQIP)? A qualitative study of NSQIP implementation in Alberta, Canada.

Not available

S-EPMC8483041 | biostudies-literature

miRNA expression in C. elegans fem-2(b245ts) and fem-3(q20ts) mutants

We compared animals that produce oocytes but no sperm fem-2(b245ts) to animals that produce sperm but no oocytes fem-3(q20ts). Using miRNA microarrays and we found that the mir-35-41 cluster genes were expressed to much greater extent in oogenesis than in spermatogenesis; furthermore, these miRNAs w...

ORGANISM(S): Caenorhabditis elegans

2010-05-16 | E-GEOD-19557 | biostudies-arrayexpress

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