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TranscriptomicsRNAi profiling of Drosophila Schneider S2 cells treated with dsRNA vs. GFP
Cis-natural antisense transcripts (cis-NATs) have been speculated to be substrates for endogenous RNA interference (RNAi), but little experimental evidence for such a pathway in animals has been reported. Analysis of massive Drosophila melanogaster small RNA data sets now reveals that endogenous sma...
ORGANISM(S): Drosophila melanogaster 
2008-06-20 | E-GEOD-11370 | biostudies-arrayexpress
GenomicsFinding binding sites for nuclear receptors in S2 Schneider cells
Finding binding sites for nuclear receptors in S2 Schneider cells
PRJNA506415 | ENA
GenomicsChIP-Seq of fly Schneider S2 cells to investigate CID islands
The centromere-specific Histone H3-variant CENH3 (also known as CENP-A) is considered to be an epigenetic mark for establishment and propagation of centromere identity. Pulse-induction of CENH3 (Drosophila CID) in Schneider S2 cells incorporates into noncentromeric regions and generates CID islands ...
ORGANISM(S): Drosophila melanogaster 
2011-07-15 | E-MTAB-652 | biostudies-arrayexpress
ProteomicsDrosophila Schneider S2 cell TFIIA-L Immunoprecipitation
In order to identify interaction partner of the Drosophila melanogaster TFIIA protein, we have immunoprecipitated an endogenously 3xFLAG-AID tagged TFIIA-L from Drosophila Schneider S2 cells
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2023-02-16 | PXD028094 | Pride
Tfiia Drosophila Ip-ms 
TranscriptomicsExpression in Aneuploid Drosophila S2 Cells
Chromosomal and segmental aneuploidies are usually lethal or common features of cancer cells and variety of disease, but little is known about how copy number relates to gene expression. Drosophila males have a single X chromosome and two sets of autosomes, but X chromosome and autosome transcripts ...
ORGANISM(S): Drosophila melanogaster 
2010-01-11 | E-GEOD-16344 | biostudies-arrayexpress
TranscriptomicsRNA-Seq on libraries made from ERCC external RNA controls, and a mixture of D. melanogaster S2 cell mRNA and ERCC mRNAs
RNA-Seq on libraries made from External RNA Controls Consortium (ERCC) external RNA controls, and a mixture of mRNA from Drosophila melanogaster S2 cell and ERCC mRNAs. We evaluated performance of RNA-Seq on known synthetic PolyA+ mRNAs from the External RNA Controls Consortium (ERCC) alone and in ...
ORGANISM(S): synthetic construct 
2010-04-19 | E-GEOD-20579 | biostudies-arrayexpress
GenomicsDrosophila melanogaster strain:Schneider 2 cells
Drosophila melanogaster strain:Schneider 2 cells Raw sequence reads
PRJNA487508 | ENA
TranscriptomicsMLE HITS-CLIP in Drosophila S2 cells
HITS-CLIP was carried out on wild-type Schneider (S2) cells using specific MLE antibodies to identify binding sites for MLE in the Drosophila transcriptome
ORGANISM(S): Drosophila melanogaster 
2013-10-30 | E-MTAB-1706 | biostudies-arrayexpress
GenomicsRole of SRP/dGATAb in the response of Drosophila S2 Schneider cells to 20-hydroxyecdysone
Role of SRP/dGATAb in the response of Drosophila S2 Schneider cells to 20-hydroxyecdysone
PRJNA1303068 | ENA
TranscriptomicsTiling path analysis of Drosophila Schneider 2 cultured cells to map forum domains
Forum domains are stretches of chromosomal DNA that are excised from eukaryotic chromosomes during their spontaneous non-random fragmentation. Mostly forum domains are of 50-200 kb in length, although larger domains, up to 500 - 700 kb, are also observed.

We performed a genome-wide mapping o...
ORGANISM(S): Drosophila melanogaster 
2010-11-01 | E-MEXP-2468 | biostudies-arrayexpress
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