Schomburg L L - OmicsDI

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Unknown (90)
Metabolomics (19)
Proteomics (3)
Transcriptomics (2)
Models (1)

Organisms

Dinoroseobacter shibae DFL 12 = DSM 16493 (1)
Pseudomonas aeruginosa PAO1 (1)
Clostridioides difficile 630 (1)
Homo sapiens (1)
bacterium BzS1 (1)

Repository

MetaboLights (19)
pride (3)
biostudies-arrayexpress (2)
FAIRDOMHub (1)

Tissue

Cell culture (1)

Technology Type

Mass spectrometry (18)
Mass Spectrometry (3)
NMR spectroscopy (2)
Shotgun proteomics (2)
Mass spectrometry assay (1)
Bottom-up proteomics (1)

Instrument Platform

GC-MS (6)
5975C Series GC/MSD (Agilent) (4)
Gas Chromatography MS - positive (3)
Gas Chromatography MS - (2)
Agilent 6550 iFunnel Accurate-Mass UHPLC-QTOFMSMS (negative mode) (1)
Agilent 6550 iFunnel Accurate-Mass UHPLC-QTOFMSMS (positive mode) (1)
Agilent GC/MS, LECO GC/TOFMS (1)
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Gas Chromatography MS (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
LECO Pegasus III, GCTOFMS (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2015 (7)
2017 (3)
2021 (3)
2014 (2)
2026 (2)
2020 (2)
2019 (2)
2013 (1)
2024 (1)
2018 (1)
2023 (1)

CHEBI ID

CHEBI:15428 (18)
CHEBI:30769 (18)
CHEBI:17754 (16)
CHEBI:18012 (16)
CHEBI:15741 (15)
CHEBI:15756 (15)
CHEBI:17497 (15)
CHEBI:26078 (15)
CHEBI:30746 (15)
CHEBI:16857 (14)
CHEBI:17268 (14)
CHEBI:24898 (14)
CHEBI:28842 (14)
CHEBI:15963 (13)
CHEBI:16000 (13)
CHEBI:16414 (13)
CHEBI:6650 (13)
CHEBI:16634 (12)
CHEBI:16865 (12)
CHEBI:17295 (12)
CHEBI:17568 (12)
CHEBI:25017 (12)
CHEBI:4167 (12)
CHEBI:78320 (12)
CHEBI:15940 (11)
CHEBI:16015 (11)
CHEBI:16199 (11)
CHEBI:17148 (11)
CHEBI:17992 (11)
CHEBI:30763 (11)

Metabolite Name

Citric acid (10)
Myo-inositol (10)
Benzoic acid (9)
Fumaric acid (9)
Glycolic acid (9)
L-threonine (9)
L-valine (9)
Succinic acid (9)
Sucrose (9)
D-galactose (8)
Glycerol (8)
Glycine (8)
L-glutamic acid (8)
L-proline (8)
Phosphoric acid (8)
Raffinose (8)
2-hydroxypyridine (7)
3-hydroxypyridine (7)
4-hydroxybenzoic acid (7)
D-fructose (7)
D-galactonic acid (7)
D-glucopyranose (7)
D-sorbitol (7)
Ethanolamine (7)
Galactinol (7)
Hydroxylamine (7)
Isoleucine (7)
L-asparagine (7)
L-phenylalanine (7)
L-threonic acid (7)

Study type

Transcription profiling by array (1)
RNA-seq of coding RNA (1)

Release Date

2023 (15)
2021 (14)
2024 (8)
2022 (8)
2020 (8)
2025 (7)
2019 (5)
2017 (5)
2016 (5)
2014 (4)
2015 (3)
2013 (2)
2018 (2)
2012 (2)
2011 (1)
2010 (1)
2003 (1)
2000 (1)

Lab affiliation

General and molecular microbiology, Institute for chemistry and biology of the marine environment (ICBM), Carl von Ossietzky University of Oldenburg, Oldenburg, Germany (1)
Institute of Biomedicine, Department of Microbiology, the Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden (1)
University of Greifswald, Institute of Microbiology, Department of Microbial Proteomics, Felix-Hausdorff-Str. 8, 17489 Greifswald, Germany (1)

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Influence of L-lactate and low glucose concentrations on the metabolism and the toxin formation of Clostridioides difficile.

Not available

S-EPMC7790285 | biostudies-literature

Neuronal selenoprotein expression is required for interneuron development and prevents seizures and neurodegeneration.

Not available

S-EPMC2830140 | biostudies-literature

Selenium supplementation and placebo are equally effective in improving quality of life in patients with hypothyroidism.

Not available

S-EPMC10895332 | biostudies-literature

Crystal structure and snapshots along the reaction pathway of a family 51 alpha-L-arabinofuranosidase.

Not available

S-EPMC204477 | biostudies-literature

Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance

The development of reliable, mixed-culture biotechnological processes hinges on understanding how microbial ecosystems respond to disturbances. Here we reveal extensive phenotypic plasticity and niche complementarity in oleaginous microbial populations from a biological wastewater treatment plant. W...

2021-04-06 | MTBLS2021 | MetaboLights

Selenium status and its determinants in very old adults: insights from the Newcastle 85+ Study.

Not available

S-EPMC10864996 | biostudies-literature

The fate of lysine: Non-targeted stable isotope analysis reveals parallel ways for lysine catabolization in Phaeobacter inhibens.

Not available

S-EPMC5653290 | biostudies-literature

Metabolic model of Sulfolobus solfataricus

2017-04-24 | 231 | FAIRDOMHub

Strong associations of serum selenoprotein P with all-cause mortality and mortality due to cancer, cardiovascular, respiratory and gastrointestinal diseases in older German adults.

Not available

S-EPMC10904445 | biostudies-literature