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ProteomicsRNA oligomers training set for the Pytheas scoring function
Mass spectrometry remains an important method for analysis of modified nucleosides ubiquitously present in cellular RNAs, in particular for ribosomal and transfer RNAs that play crucial roles in mRNA translation and decoding. Furthermore, modifications have effect on the lifetimes of nucleic acids i...
ORGANISM(S): Escherichia coli 
2022-05-04 | PXD030435 | Pride
Training set Scoring function Rna Pytheas 
ModelsHoppe2012 - Predicting changes in metabolic function using transcript profiles (HepatoNet1b_mouse)
Hoppe2012 - Predicting changes in metabolic function using transcript profiles Measuring metabolite concentrations, reaction fluxes, and enzyme activities on large scale are tricky tasks in the study of cellular metabolism. Here, a method that predicts activity changes of metaboli...
2014-03-17 | MODEL1208060000 | BioModels
GenomicsIdentification of smRNA-based cell-type markers for the stem cell manufacture system with a statistical scoring function
Identification of smRNA-based cell-type markers for the stem cell manufacture system with a statistical scoring function
PRJNA852701 | ENA
TranscriptomicsDe novo kidney transplantation without use of calcineurin inhibitors preserves renal structure and function
Background: Despite significant improvements in short-term kidney transplant survival, comparable increases in 5 and 10-year outcomes have not been achieved. Chronic allograft nephropathy (CAN) is a major cause of late graft loss. Toxic nephropathy and inadequate long-term immunosuppression are poss...
ORGANISM(S): Homo sapiens 
2004-09-23 | E-GEOD-1743 | biostudies-arrayexpress
UnknownVinardo: A Scoring Function Based on Autodock Vina Improves Scoring, Docking, and Virtual Screening.
Not available
S-EPMC4865195 | biostudies-literature
UnknownScoring and lessons learned with the CSAR benchmark using an improved iterative knowledge-based scoring function.
Not available
S-EPMC3190652 | biostudies-literature
UnknownScoring function to predict solubility mutagenesis.
Not available
S-EPMC2958853 | biostudies-literature
UnknownGDockScore: a graph-based protein-protein docking scoring function.
Not available
S-EPMC10290236 | biostudies-literature
UnknownLin_F9: A Linear Empirical Scoring Function for Protein-Ligand Docking.
Not available
S-EPMC8478859 | biostudies-literature
UnknownTraining a scoring function for the alignment of small molecules.
Not available
S-EPMC2946173 | biostudies-literature
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