Sea anemone - OmicsDI

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Unknown (493)
Genomics (185)
Transcriptomics (67)
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Nematostella vectensis (39)
Andropogon gerardi (21)
Bacteria (21)
Canis lupus familiaris (21)
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Cricetulus griseus (21)
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cellular organisms (1)
Chironex fleckeri (1)

Organisms

Nematostella vectensis (30)
Exaiptasia diaphana (11)
Anthopleura xanthogrammica (4)
Anthopleura elegantissima (4)
Metridium senile (4)
Anemonia viridis (3)
sea anemone metagenome (3)
Bunodosoma caissarum (2)
Actinia tenebrosa (2)
Actinia equina (2)
Paracondylactis sinensis (2)
Drosophila melanogaster (2)
Caenorhabditis elegans (2)
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Actinernus sp. WN-2022 (1)
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Sneathiella marina (1)
Calliactis polypus (1)
Epiactis japonica (1)
Schmidtea polychroa (1)
Platynereis dumerilii (1)
Anthopleura dowii (1)
Brevibacterium sanguinis (1)
Mnemiopsis leidyi (1)
Heteractis magnifica (1)
Brevibacterium casei (1)
Synandwakia multitentaculata (1)
Hypsibius dujardini (1)
Amphimedon queenslandica (1)

Repository

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geo (45)
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pride (21)
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Tissue

Whole body (5)
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Embryo (2)
Oocyte (2)
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Multicellular organism (1)
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Mass Spectrometry (21)
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NextSeq 500 (3)
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2011 (8)
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2018 (11)
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2013 (4)
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Study type

RNA-seq of coding RNA (14)
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2000 (1)
1999 (1)

Lab affiliation

Department of Ecology, Evolution and Behavior Alexander Silberman Institute of Life Sciences Faculty of Science The Hebrew University of Jerusalem (2)
Department of ecology, evolution and behavior, Hebrew University of Jerusalem, Jerusalem, Israel (2)
School of Biological Sciences, Victoria University of Wellington, New Zealand (2)
Amherst College (1)
CIIMAR-UP (1)
College of Science and Engineering, Flinders University, Bedford Park, South Australia 5042, Australia (1)
Donnelly Centre for Cellular and Biomolecular Research, Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada (1)
Institute for Molecular Bioscience, The University of Queensland, St. Lucia, QLD 4072, Australia (1)
Living Systems Institute, University of Exeter, Exeter, England, United Kingdom (1)
Queensland University of Techology, Faculty of Science, School of Biological and Environmental Science (1)
School of Biological Sciences Victoria University of Wellington New Zealand (1)
School of Biological Sciences, Victoria University of Wellington (1)
School of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand (1)
School of Biology and Environmental Sciences, Science and Engineering Faculty, Queensland University of Technology, Brisbane, Australia (1)
University of Bergen, Norway (1)
University of Cadiz (1)
University of California San Francisco (1)
University of Macau (1)

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Early and late response of Nematostella vectensis transcriptome to heavy metals

Environmental contamination from heavy metals poses a global concern for the marine environment, as heavy metals are passed up the food chain and persist in the environment long after the pollution source is contained. Cnidarians, dating back to 700 million years ago, play an important role in shapi...

ORGANISM(S): Nematostella vectensis

2015-12-22 | E-GEOD-58769 | biostudies-arrayexpress

Endoderm- vs ectoderm-specific expression of symbiosis genes in the snakelocks sea anemone

Transcriptional comparison between endodermal and ectodermal compartment in symbiotic sea anemones Anemonia viridis were analysed in several specimens. We generated an oligonucleotide microarray (2000 selected features), which is to date the only available oligonucleotide array for symbiotic cnidari...

ORGANISM(S): Anemonia viridis

2011-06-01 | E-GEOD-22361 | biostudies-arrayexpress

RNA-seq of NvElav1::mOrange positive and NvElav1::mOrange negative cells from Nematostella vectensis

NvElav1::mOrange is a stable transgenic line that labels a large fraction of the nervous system of the sea anemone Nematostella vectensis (Nakanishi et al., Development 2012). Two week old primary polyps were dissociated and the NvElav1::mOrange positive cells were enriched by FACS.

ORGANISM(S): Nematostella vectensis

2020-02-28 | E-MTAB-8794 | biostudies-arrayexpress

Tissue specific differential expression in response to a thermal stress in the snakelocks sea anemone.

Differential expression between endodermal (zooxanthellate) and ectodermal tissue layers in the endosymbiotic sea anemone Anemonia viridis has been analyzed for 3 specimens subjected to a thermal stress (+10°C) for a 2 days period. A symbiosis-dedicated oligonucleotide microarray (2000 selected feat...

ORGANISM(S): Anemonia viridis

2011-11-17 | E-GEOD-28576 | biostudies-arrayexpress

sea anemone metagenome

sea anemone metagenome Targeted loci environmental

PRJNA325476 | ENA

Symbiosis in Anemonia viridis sea anemones

This SuperSeries is composed of the following subset Series: GSE22360: Transcriptomic adaptations to symbiotic life in cnidarians : symbiotic vs bleached Anemonia viridis sea anemones GSE22361: Endoderm- vs ectoderm-specific expression of symbiosis genes in the snakelocks sea anemone Refer to indivi...

ORGANISM(S): Anemonia viridis

2011-06-01 | E-GEOD-22375 | biostudies-arrayexpress

Transcriptomic adaptations to symbiotic life in cnidarians: symbiotic vs bleached Anemonia viridis sea anemones

Transcriptional comparison between symbiotic and non-symbiotic (bleached) sea anemones Anemonia viridis were analysed in several specimens. We generated an oligonucleotide microarray (2000 selected features), which is to date the only available oligonucleotide array for symbiotic cnidarians. We were...

ORGANISM(S): Anemonia viridis

2011-06-01 | E-GEOD-22360 | biostudies-arrayexpress

Proteotranscriptomics of the most popular hoast sea anemone Entacmaea quadricolor reveals not all toxin genes expressed are recruited into its venom arsenal

While the unique symbiotic relationship between anemonefish and sea anemones is iconic, it is still not fully understood how anemonefish withstand and thrive within this venomous host environment. In this study we used a proteotranscriptomics approach to elucidate the proteinaceous toxin repertoire ...

ORGANISM(S): Entacmaea quadricolor

2024-01-24 | PXD048736 | Pride

Actinia fragacea proteome - tissues, mucus, nematocysts

In this study, we investigate the proteomic landscape of the understudied sea anemone Actinia fragacea by characterizing its venomous nematocyst extract, various tissues, and mucus secretions. Using high-throughput liquid chromatography coupled with mass spectrometry (LC-MS), we provide a comprehens...

ORGANISM(S): Actinia fragacea

2025-04-22 | PXD060643 | Pride

Toxin Cnidaria Actinia fragacea Bioactive compounds Sea anemone

Cellular and transcriptional trajectories of adult neural fate specification in a sea anemone

We investigated the cellular and transcriptional trajectories of adult neurogenesis in the sea anemone Nematostella vectensis through single-cell transcriptome analysis of Elav>KikGR+, FoxL2>KikGR+, SoxC>KikGR+ body wall with mesenteries (no oral region) adult samples.

ORGANISM(S): Nematostella vectensis

2026-01-12 | GSE288441 | GEO

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