Seahorse - OmicsDI

Show results for

Unknown (1087)
Transcriptomics (581)
Genomics (163)
Proteomics (104)
Metabolomics (59)
Other (2)
Models (1)
Methylation profiling (1)

Organisms

Mus musculus (381)
Rattus norvegicus (140)
Homo sapiens (99)
Schizophyllum commune H4-8 (23)
Mycobacterium tuberculosis SP7 (23)
Oryza sativa Japonica Group (23)
Crotalus durissus terrificus (23)
Eriocheir sinensis (23)
Candidatus Endoriftia persephonae (23)
Mycobacterium tuberculosis SP10 (23)
Mycobacterium tuberculosis SP13 (23)
Cotesia typhae (23)
Mycobacterium tuberculosis SP22 (23)
Cepaea nemoralis (23)
Enterobacter ludwigii (23)
Macaca mulatta (5)
Sus scrofa (3)
Macaca fascicularis (2)
Rattus rattus (2)
Monopterus albus (1)
Pan troglodytes (1)
Chlorocebus sabaeus (1)
Mus musculus domesticus (1)
Bos taurus (1)
Ovis aries (1)
Rattus (1)
Danio rerio (1)
Mus (1)
Tityus bahiensis (1)
Gasterosteus aculeatus (1)

Organisms

Homo sapiens (42)
Mus musculus (42)
Hippocampus mohnikei (2)
Hippocampus abdominalis (2)
Hippocampus erectus (2)
Rattus norvegicus (2)
Hippocampus bargibanti (1)
Hippocampus (1)
Syngnathidae sp. PRJNA1494570 (1)
Hippocampus kuda (1)
Syngnathiformes (1)
Rattus (1)
Danio rerio (1)
feces metagenome (1)
Sus scrofa (1)
Bacillus cereus (1)

Repository

biostudies-arrayexpress (531)
ENA (131)
geo (84)
MassIVE (58)
GNPS (46)
pride (23)
jPOST (13)
MetaboLights (13)
iProX (8)
PanoramaPublic (2)
BioModels (1)
EVA (1)
GPMDB (1)

Tissue

Cell culture (8)
Brain (3)
Epithelial cell (2)
T cell (2)
Meningioma cell (1)
Beige adipocyte (1)
Adipose-derived stromal cell (1)
Mesenchymal stem cell of adipose (1)
Aortic valve (1)
Bone marrow macrophage (1)
Gastrocnemius (1)
Astrocyte (1)
Keratinocyte (1)
Bone marrow (1)
Leukocyte (1)
Fibroblast (1)
Lung (1)
Permanent cell line cell (1)
B cell (1)
Liver (1)
Colon (1)

Disease

Normal (4)
Alzheimer's disease (3)
Temporal lobe epilepsy (2)
Cerebral ischemia (2)
Meningioma (2)
Melanoma (2)
Acute leukemia (2)
Nurr1 lentivirus (1)
Early-life seizures (1)
Pneumococcal meningitis (1)
Reference (1)
Not Available (1)
Neurofibromatosis 1 (1)
Lung cancer (1)
Neuroblastoma (1)
Pancreatic cancer (1)
Type 2 diabetes mellitus (1)
Breast cancer (1)
Colon cancer (1)

Technology Type

Mass Spectrometry (23)
Shotgun proteomics (12)
Mass spectrometry assay (8)
Bottom-up proteomics (5)
Mass spectrometry (3)
Data-dependent acquisition (3)
NMR spectroscopy (2)
Immunopeptidomics (2)
All-ion fragmentation (1)
Data-independent acquisition (1)
Top-down proteomics (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

LTQ Orbitrap Velos (41)
Illumina HiSeq 2500 (14)
GC-MS (12)
GC MS (10)
Illumina NovaSeq 6000 (8)
Q Exactive (8)
Orbitrap Fusion Lumos (7)
NextSeq 500 (4)
Illumina HiSeq 2000 (3)
Illumina HiSeq 4000 (3)
LTQ Orbitrap (3)
Agilent 7890A GC with 5975C inert XL MSD (2)
1200 series LC/MSD SL (2)
Orbitrap Exploris 480 (2)
Q Exactive HF-X (2)
LTQ Orbitrap Elite (2)
MouseWG-6_V2_0_R3_11278593_A (1)
G2565AA DNA microarray scanner [Agilent] (1)
Illumina Genome Analyzer IIx (1)
GenePix 4000B [Axon Instruments] (1)
Scanning hardware (1)
Nanodrop spectrophotometer (1)
No (1)
NextSeq 2000 (1)
HiSeq X Ten (1)
NextSeq 550 (1)
- (1)
6110 Quadrupole LC/MS (1)
Agilent GC-MS (1)
Instrument (1)

Publication Date

2014 (71)
2013 (71)
2016 (70)
2015 (58)
2008 (50)
2011 (47)
2012 (42)
2026 (41)
2010 (41)
2024 (37)
2017 (30)
2007 (29)
2023 (28)
2025 (28)
2019 (25)
2020 (23)
2009 (22)
2021 (17)
2022 (11)
2018 (10)
2006 (6)
2005 (6)
2003 (4)
2004 (1)

CHEBI ID

CHEBI:8927 (1)
CHEBI:168308 (1)
CHEBI:793340 (1)
CHEBI:37632 (1)
CHEBI:24859 (1)
CHEBI:58216 (1)
CHEBI:59908 (1)
CHEBI:37636 (1)
CHEBI:37635 (1)
CHEBI:37634 (1)
CHEBI:58235 (1)
CHEBI:52288 (1)
CHEBI:16759 (1)
CHEBI:27823 (1)
CHEBI:57627 (1)
CHEBI:58414 (1)
CHEBI:57660 (1)
CHEBI:58600 (1)
CHEBI:58039 (1)
CHEBI:36986 (1)
CHEBI:45479 (1)
CHEBI:57561 (1)
CHEBI:57632 (1)
CHEBI:58052 (1)
CHEBI:57658 (1)
CHEBI:28146 (1)
CHEBI:57836 (1)
CHEBI:18402 (1)
CHEBI:57880 (1)
CHEBI:16466 (1)

Metabolite Name

AMP (5)
Taurine (5)
Leucine (4)
Myo-Inositol (4)
Uracil (4)
ATP (4)
Malate (4)
Hypoxanthine (4)
Creatinine (4)
ADP (4)
Glutathione (4)
Cytidine (4)
Xanthine (4)
Inosine (4)
Galacturonic acid (3)
Glucose-6-phosphate (3)
Pentadecanoic acid (3)
Allantoic acid (3)
Epicatechin (3)
Thymine (3)
Sorbitol (3)
Nicotinic acid (3)
Succinic acid (3)
Dopamine (3)
Nonadecanoic acid (3)
Pantothenic acid (3)
Xanthosine (3)
Catechin (3)
Arachidonic acid (3)
Citric acid (3)

First Public Date

2026 (38)
2025 (30)
2024 (19)
2023 (11)
2021 (7)
2022 (6)
2020 (5)
2019 (4)
2017 (4)
2018 (3)
2015 (2)
2016 (1)
2014 (1)

Modelling Approach

Metabolic network (1)
Constraint-based model (1)

Lab affiliation

UAB CCC MS Proteomics Facility (2)
Department of oncology UNIL CHUV Ludwig Institute for Cancer Research Lausanne Office B25A/04/94 Rue du Bugnon 25a, CH-1005 Lausanne (2)
Dr Michal BASSANI-STERNBERG ¬ Group leader Laboratory Hi-TIDe: Immunopeptidomics Head of clinical Mass spectrometry unit Center of experimental therapeutics Department of oncology UNIL CHUV Ludwig Institute for Cancer Research Lausanne Biopôle 3 Chemin des Boveresses 155, CH-1066 Lausanne (1)
Centre de Recherche en Cancérologie de Marseille (CRCM) Inserm U1068 - CNRS UMR7258 - Institut Paoli-Calmettes - Aix-Marseille Université Campus de Luminy, Case 915, 163 Avenue de Luminy 13288 Marseille Cedex 9 - FRANCE (1)
Segal Cancer Proteomics Centre, Lady Davis Institute for Medical Research, Jewish General Hospital, Montréal, Quebec, H3T 1E2, Canada Gerald Bronfman Department of Oncology, McGill University, Montréal, Quebec H4A 3T2, Canada Department of Pathology, McGill University, Montréal,Quebec H4A 3J1, Canada (1)
Department of Biochemistry and Molecular Biology, University of Nebraska Medical Center, Omaha NE (1)
Translational Medicine, School of Science, Engineering and Environment (SEE), Biomedical Research Centre (BRC), University of Salford, Greater Manchester, M5 4WT, United Kingdom (1)
Department of oncology UNIL CHUV Ludwig Institute for Cancer Research Lausanne Centre de recherche Agora Rue du Bugnon 25A CH-1011 Lausanne Switzerland (1)
Group leader Laboratory Hi-TIDe: Immunopeptidomics Head of clinical Mass spectrometry unit Center of experimental therapeutics Department of oncology UNIL CHUV Ludwig Institute for Cancer Research Lausanne Biopôle 3 Chemin des Boveresses 155, CH-1066 Lausanne (1)
Department of Molecular Medicine and Neurodegeneration New Medicines Center, The Scripps Research Institute, La Jolla, CA 92037, USA (1)
Department of Oncology, University Hospital of Lausanne, Ludwig Institute for Cancer Research, Lausanne, Switzerland. (1)
University of Siena (1)
Cell Signalling & Immunology, School of Life Sciences, University of Dundee (1)
Department of Biochemistry and Molecular Biology University of Southern Denmark Campusvej 55 DK-5230 Odense M Denmark (1)
Department of Neurosurgery, The Second Affiliated Hospital of Harbin Medical University, China (1)
Diabetes, Endocrinology and Metabolism at Beth Israel Deaconess Medical Center and Harvard Medical School. Howard Hughes Medical Institute. Boston, MA, 02115 (1)
Center for Interdisciplinary Cardiovascular Sciences, Division of Cardiovascular Medicine, Department of Medicine, Brigham Women's Hospital, Harvard Medical School, Boston, MA, United States (1)
Department of Anatomy and Cell Biology, Martin Luther University Faculty of Medicine, Halle (Saale), Germany (1)
Max-Planck-Institute of Biochemistry (1)
Department of oncology UNIL CHUV Ludwig Institute for Cancer Research Lausanne (1)
Head / Immunopeptidomics unit Department of Oncology,CHUV Ludwig Cancer Research Center (1)