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MetabolomicsExploring the effect of estrogen on Candida albicans hyphal cell wall glycans and ergosterol synthesis
Increased levels of 17-β estradiol (E2) due to pregnancy in young women or to hormonal replacement therapy in postmenopausal women have long been associated with an increased risk of yeast infections. Nevertheless, the effect underlying the role of E2 in Candida albicans infections is not wel...
2025-09-11 | MTBLS5821 | MetaboLights
TranscriptomicsTranscription profiling of Arabidopsis stem, leaf and hypocotyl tissue undergoing varying amounts of secondary cell wall synthesis
The aim of this experiment was to understand secondary cell wall formation as it is a major constituent of wood and plant fibres. To identify potential novel genes involved in this process, data has been generated from Arabidopsis stem, leaf and hypocotyl tissue undergoing varying amounts of seconda...
ORGANISM(S): Arabidopsis thaliana 
2006-01-01 | E-MEXP-265 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of secondary cell wall development in Medicago truncatula
Global transcriptional profiling has been successfully used to identify genes and regulatory pathways in secondary cell wall thickening. A systematic microarray assay of secondary cell wall development along stem maturation in Medicago truncatula was conducted to identify genes and pathways that are...
ORGANISM(S): Medicago truncatula 
2016-06-28 | E-MTAB-3909 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidiopsis with NST1 over-expression vs wild type
In plants, secondary wall thickenings play important roles in various biological processes, although the factors regulating these processes remain to be characterized. We show that expression of chimeric repressors derived from NAC SECONDARY WALL THICKENINGS PROMOTING FACTOR1 (NST1) and NST2 in Arab...
ORGANISM(S): Arabidopsis thaliana 
2008-06-12 | E-GEOD-3363 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis wild type, MYB46 over-expressing, MYB83 over-expressing and myb46/myb83 double mutants to investigate the regulation mechanism of secondary cell wall synthesis during xylem vessel differentiation
To investigate the regulation mechanism of secondary cell wall synthesis during xylem vessel differentiation, we analyzed the function of two Arabidopsis MYB transcription factors, MYB46 and MYB83. Microarray analysis was performed for 11-day old seedlings of wild-type, MYB46 over-expressor, MYB83 o...
ORGANISM(S): Arabidopsis thaliana 
2010-05-01 | E-MEXP-2445 | biostudies-arrayexpress
MetabolomicsA metabolite roadmap of the wood-forming tissue in Populus tremula (UPLC-MS assay; Wood fibre and ray cell tissue)

Wood, or secondary xylem, is the product of xylogenesis, a developmental process that begins with the proliferation of cambial derivatives and ends with mature xylem fibers and vessels with lignified secondary cell walls. Fully mature xylem has undergone a series of cellular processes, including ...

2020-09-01 | MTBLS1831 | MetaboLights
GenomicsAtMAN6 coordinates cell growth and secondary cell wall formation in xylem development
AtMAN6 coordinates cell growth and secondary cell wall formation in xylem development
PRJNA1020170 | ENA
TranscriptomicsExpression data from Arabidopsis C3H14/15 overexpressors, c3h14c3h15 double mutant vs wild type
In plants, CCCH zinc finger proteins involved in secondary wall formation and anther development are poorly understood. We have functionally identified two homologous genes C3H14 and C3H15 and found that the two genes differentially regulate secondary wall formation and anther development. C3H14 con...
ORGANISM(S): Arabidopsis thaliana 
2015-04-07 | E-GEOD-53580 | biostudies-arrayexpress
TranscriptomicsTranscriptome profiling across the cell wall expansion continuum in the Arabidopsis primary stem
Comparison of full-genome transcriptome profiles of four stages along the cell wall expansion continuum of the elongating inflorescence primary stem of Arabiopdis thaliana; plants ranging in height from 10-15cm.
ORGANISM(S): Arabidopsis thaliana 
2012-01-26 | E-MEXP-3525 | biostudies-arrayexpress
ProteomicsCell type-specific control of secondary cell wall formation by Musashi-type translational regulators in Arabidopsis
Deciphering the mechanism of secondary cell wall/SCW formation in vascular plants is key to understanding their development and the molecular basis of biomass recalcitrance. A sophisticated network of transcription factors has been implicated in SCW synthesis in plants, but little is known about the...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2023-09-28 | PXD040207 | Pride
Arabidopsis Musashi-type transcriptional regulator Cell wall Interactomic 
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