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MetabolomicsRegulatory actors and alternative routes for Arabidopsis seed germination are revealed using a pathway‐based analysis of transcriptomic datasets
Regulation of seed germination by dormancy relies on a complex network of transcriptional and post‐transcriptional modifications during seed imbibition that controls seed adaptive responses to environmental cues. High‐throughput technologies have brought significant progress in the understanding of ...
2019-05-21 | MTBLS662 | MetaboLights
MetabolomicsCharacterization of the heat-stable proteome during seed germination in Arabidopsis with special focus on LEA proteins
During seed germination, desiccation tolerance is lost in the radicle with progressing radicle protrusion and seedling establishment. This process is accompanied by comprehensive changes of the metabolome and proteome. Germination of Arabidopsis seeds was investigated over 72 h with special focus on...
2021-07-29 | MTBLS2980 | MetaboLights
MetabolomicsAnalysis of seed germination attributes and kinetics of Polygonatum sibiricum Red. through metabolomics and transcriptomics

Polygonatum sibiricum Red. (P. sibiricum) seeds exhibit strong dormancy, which prolongs germination period, reduces germination rate, and thus hinders its production. Research on breaking seed dormancy via optimized sand storage and clarifying germination-related mechanisms is insufficient. This ...

2026-03-24 | MTBLS14022 | MetaboLights
MetabolomicsHow Does the Seed Pre-germinative Metabolism Fight against Imbibition Damage? Emerging Roles of Fatty Acid Cohort and Antioxidant Defence

During seed imbibition, lipids are engaged in membrane reorganization while facing free radical-mediated oxidative injury. In the present work, we explored changes in lipid components at different timepoints of imbibition (0.5, 2, 4, 6, and 8 h) in the legume Medicago truncatula, by combining bio...

2019-10-14 | MTBLS181 | MetaboLights
MetabolomicsUltrasound Priming Enhances Seed Vigor and Multiple Stresses Tolerance in Aged Maize Seeds

Seed aging leads to reduced germination rates and vigor, particularly under stress conditions. We subjected aged maize seeds to 40 seconds of ultrasonic treatment, which enhanced their vigor and tolerance to combined stress. The ultrasonic treatment increased more cracks and holes in the seed coa...

2026-03-25 | MTBLS14138 | MetaboLights
MetabolomicsUltrasound Priming Enhances Seed Vigor and Multiple Stresses Tolerance in Aged Maize Seeds
Seed vigor plays a crucial role in germination rate, population uniformity, seedling stress resistance and potential yield at maturity. Here we report a simple, eco-friendly physical method (40-second ultrasound) that rapidly triggers aged seeds to enhance seed vigor and stress resistance. Significa...
2026-07-15 | MTBLS15047 | MetaboLights
TranscriptomicsLepidium sativum seed germination timecourse
This series analyses germinating Lepidium sativum seeds with both temporal and spatial detail. This is a cross species microarray normalisation on Arabidopsis thaliana chips. Performed as part of the vSEED project Lepidium seeds were dissected into four compartments at seven time points during seed ...
ORGANISM(S): Lepidium sativum 
2015-02-20 | E-GEOD-55702 | biostudies-arrayexpress
ProteomicsProteomic analysis of seed germination of wheat (Triticum aestivum L.)
In this study, we performed the first dynamic proteome analysis of wheat seed germination using a two-dimensional differential gel electrophoresis (2D-DIGE)-based proteomic approach. A total of 166 differentially expressed protein (DEP) spots representing 73 unique proteins were identified.
ORGANISM(S): Triticum aestivum (Wheat) 
2015-12-09 | PXD003083 | Pride
2d-dige  proteome. Bread wheat Seed germination 
ProteomicsShotgun proteomic analysis of embryonic axis of soybean seeds during germination under salt stress
Salinity is one of the main environmental stresses worldwide limiting soybean growth and yield. Seed imbibition and radical emergence are generally less affected by salinity in soybean. Towards unraveling the mechanisms underlying salt tolerance in soybean at germination stage, a comprehensive quant...
ORGANISM(S): Glycine Max (ncbitaxon:3847) 
2016-08-15 | MSV000080044 | MassIVE
TranscriptomicsBarley Germination and Seedling Growth Time Course
Analysis of barley grains/seedlings representing six well characterized and distinct germination stages over the course of seed germination and seedling growth. Three biological replications, six developmental stages.
ORGANISM(S): Hordeum vulgare 
2011-04-01 | E-GEOD-23595 | biostudies-arrayexpress
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