Segal Y Y - OmicsDI

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Unknown (526)
Genomics (24)
Transcriptomics (24)
Proteomics (11)
Metabolomics (2)

Organisms

Caenorhabditis elegans (23)
Homo sapiens (16)
Saccharomyces cerevisiae (10)
Mus musculus (7)
Rattus norvegicus (1)
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Repository

biostudies-arrayexpress (48)
pride (10)
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Cell culture (2)
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Disease

Sarcoma (1)
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Technology Type

Mass Spectrometry (10)
Shotgun proteomics (3)
Mass spectrometry (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
Data-independent acquisition (2)
NMR spectroscopy (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Bottom-up proteomics (1)
Gel-based experiment (1)

Instrument Platform

Illumina HiSeq 2500 (2)
Orbitrap Fusion (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - negative - reverse phase (1)
Nuclear Magnetic Resonance (NMR) - (1)
Q Exactive (1)

Publication Date

2011 (22)
2010 (11)
2012 (4)
2017 (3)
2007 (3)
2005 (3)
2019 (3)
2020 (3)
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2025 (2)
2016 (1)
2013 (1)
2008 (1)
2022 (1)
2021 (1)

CHEBI ID

CHEBI:15428 (2)
CHEBI:16359 (2)
CHEBI:16449 (2)
CHEBI:17234 (2)
CHEBI:17368 (2)
CHEBI:17568 (2)
CHEBI:18186 (2)
CHEBI:24898 (2)
CHEBI:25017 (2)
CHEBI:25094 (2)
CHEBI:26806 (2)
CHEBI:27266 (2)
CHEBI:78320 (2)
CHEBI:10072 (1)
CHEBI:111517 (1)
CHEBI:1148 (1)
CHEBI:132188 (1)
CHEBI:132948 (1)
CHEBI:132966 (1)
CHEBI:132994 (1)
CHEBI:133005 (1)
CHEBI:133032 (1)
CHEBI:133066 (1)
CHEBI:133089 (1)
CHEBI:133119 (1)
CHEBI:133148 (1)
CHEBI:133172 (1)
CHEBI:133181 (1)
CHEBI:133183 (1)
CHEBI:133186 (1)

Metabolite Name

(R)-3-hydroxybutyrylcarnitine (1)
1,3,7-trimethylurate (1)
1,7-dimethylurate (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPE (P-16:0/20:4)* (1)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPE (P-16:0/18:2)* (1)
1-(1-enyl-stearoyl)-2-linoleoyl-GPE (P-18:0/18:2)* (1)
1-methyl-4-imidazoleacetate (1)
1-methyladenine (1)
1-methyladenosine (1)
1-methylguanidine (1)
1-methylguanine (1)
1-methylhistamine (1)
1-methylhistidine (1)
1-methylnicotinamide (1)
1-methylxanthine (1)
1-oleoyl-2-linoleoyl-GPC (18:1/18:2)* (1)
1-palmitoyl-2-linoleoyl-GPC (16:0/18:2) (1)
1-palmitoyl-2-oleoyl-GPC (16:0/18:1) (1)
1-palmitoyl-2-palmitoleoyl-GPC (16:0/16:1)* (1)
1-palmitoyl-2-stearoyl-GPC (16:0/18:0) (1)
1-stearoyl-2-arachidonoyl-GPC (18:0/20:4) (1)
1-stearoyl-2-arachidonoyl-GPE (18:0/20:4) (1)
1-stearoyl-2-oleoyl-GPC (18:0/18:1) (1)
1-stearoyl-2-oleoyl-GPE (18:0/18:1) (1)
16a-hydroxy DHEA 3-sulfate (1)
2'-AMP (1)
2'-O-methylcytidine (1)
2'-O-methyluridine (1)
2'-deoxyadenosine (1)
2'-deoxyguanosine (1)

Study type

ChIP-seq (24)
Transcription profiling by array (8)
Unknown experiment type (6)
ChIP-chip by tiling array (5)
RNA-seq of coding RNA (4)
Other (1)

Release Date

2022 (67)
2024 (53)
2021 (53)
2023 (46)
2025 (43)
2020 (37)
2019 (34)
2011 (31)
2017 (30)
2018 (30)
2016 (25)
2010 (25)
2015 (22)
2014 (18)
2013 (13)
2012 (12)
2009 (8)
2026 (6)
2008 (5)
2007 (4)
2005 (4)
2006 (3)
2000 (2)
2004 (1)
2003 (1)
2002 (1)

Lab affiliation

1. Department of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada; 2. University of Victoria Genome BC Proteomics Centre, University of Victoria, Victoria, British Columbia, Canada; 3. Gerald Bronfman Department of Oncology, Jewish General Hospital, Montreal, Quebec, Canada; 4. Segal Cancer Proteomics Centre, Lady Davis Institute, Jewish General Hospital, McGill University, Montreal, Quebec, Canada (2)
Advanced Technology Walter & ELiza Hall Institute (1)
ISAS Otto-Hahn-Str. 6b 44227 Dortmund Germany (1)
Laboratory Head and Chemical Biology Division Head, WEHI, Australia (1)
Professor • Centre for Targeted Protein Degradation (1)
Professor• Centre for Targeted Protein Degradation (1)
Segal Cancer Proteomics Centre, Jewish General Hospital, Montreal, QC, Canada Gerald Bronfman Department of Oncology, Jewish GeneraHospital, Montreal, QC, Canada Division of Experimental Medicine, McGill University, Montreal, QC, Canada Department of Pathology, McGill University, Montreal, QC, Canada (1)
The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel (1)
Weizmann Institute of Science Israel (1)

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Analyzing the role of transcription elongation factors Spt4-5 in splicing

A set of 22 expts. aimed at identifying splicing events dependent upon on the Spt4-5 transcription elongation factors in yeast. Four spt mutants and an mRNA capping mutant were analyzed four times each, including biological and technical (dye-swap) replicates. Two wt vs wt expts. were also perform...

ORGANISM(S): Saccharomyces cerevisiae

2010-06-09 | E-GEOD-1610 | biostudies-arrayexpress

Determination of Protein Monoclonal-Antibody Epitopes by a Combination of Structural Proteomics Methods.

Not available

S-EPMC10476242 | biostudies-literature

Proteogenomics of Colorectal Cancer Liver Metastases: Complementing Precision Oncology with Phenotypic Data.

Not available

S-EPMC6966481 | biostudies-literature

Utility, promise, and limitations of liquid chromatography-mass spectrometry-based therapeutic drug monitoring in precision medicine.

Not available

S-EPMC8597589 | biostudies-literature

Identification of binding sites for ivacaftor on the cystic fibrosis transmembrane conductance regulator.

Not available

S-EPMC8184517 | biostudies-literature

ExSTA: External Standard Addition Method for Accurate High-Throughput Quantitation in Targeted Proteomics Experiments.

Not available

S-EPMC6084352 | biostudies-literature

A Simplified Proteomics LC-MRM-MS Assay for Determination of apoE Genotypes in Plasma Samples.

Not available

S-EPMC11002930 | biostudies-literature

A Non-Hazardous Deparaffinization Protocol Enables Quantitative Proteomics of Core Needle Biopsy-Sized Formalin-Fixed and Paraffin-Embedded (FFPE) Tissue Specimens.

Not available

S-EPMC9031572 | biostudies-literature

Differences in National Diabetes Treatment Patterns and Trends between Older and Younger Adults.

Not available

S-EPMC6488408 | biostudies-literature

Response of yeast cells to stress

Stress experiments repeating Gasch et al.,2000 conditions (Mol Biol Cell. 2000 Dec;11(12):4241-57). For each set of conditions I compared a deletion mutant for a predicted transcription regulator with a congenic wt strain. Groups of assays that are related as part of a time series. Computed

ORGANISM(S): Saccharomyces cerevisiae

2005-12-14 | E-GEOD-3812 | biostudies-arrayexpress