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We developed a non-invasive ex vivo HT29 cell-based minimal model to fingerprint the mucosa-associated microbiota fraction in humans. HT29 cell-associated fractions were characterized by the universal phylogenetic array platform HTF-Microbi.Array, both in presence or in absence of a TNF-M-NM-1-media...
ORGANISM(S): human gut metagenome 
The combination of genetic analysis and genome-wide expression profiles make Saccharomyces cerevisiae the cradle of Systems Biology. The way S. cerevisiae uses carbon sources has long been a landmark for studies concerning cellular responses to environmental conditions. S. cerevisiae conserves the e...
ORGANISM(S): Saccharomyces cerevisiae 
In order to clarify the mechanism to MYC (8q24) amplification as dmin or hsr, we finely investigated the organization of amplicons in seven tumor cell lines [four SCLC, one AML, and two Colon Carcinoma (CC)] by integrating next-generation sequencing (NGS), Fluorescent in situ hybridization (FISH), P...
ORGANISM(S): Homo sapiens 
Genome-wide mapping of H3K4me1, H3K4me3 and H3K27ac in KP and DK ChIP-seq for H3K4me1, H3K4me3 and H3K27ac in KP and DK p63 profiling of DK through ChIP-seq
ORGANISM(S): Homo sapiens 
Transcriptional profiling of KP and DK through RNA-seq RNA-sequencing of KP and DK
ORGANISM(S): Homo sapiens 
Investigation of promoters usage in KP cells KP cells promoter usage profiling by CAGE-seq
ORGANISM(S): Homo sapiens 
Gene expression profiling of progenitor and differentiated keratinocytes by Affymetrix microarray Analysis of the transcriptome of progenitors and differentiated keratinocytes, in order to identify genes that are differentially expressed during human skin differentiation.
ORGANISM(S): Homo sapiens 
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