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TranscriptomicsTranscription profiling of human neural crest cells
The expression profiles of five human trunk level neural crest cell lines were determined on Affymetrix chips HG U133 Plus 2.0. Experiment Overall Design: Total RNA was extracted from a confluent 10 cm dish of hNCC (lines N1-N5) from five human embryos at 26-32 dpf (Carnegie stages 12 & 13).
ORGANISM(S): Homo sapiens 
2009-09-13 | E-GEOD-14340 | biostudies-arrayexpress
TranscriptomicsTranscriptional analyses of the ectomycorrhizal (ECM) fungus Paxillus involutus during growth on various lignocellulose soil substrates
In this study, examinations were performed on how the ECM fungus Paxillus involutus degrade complex, plant and litter material by using elemental analyses, FTIR spectroscopy, pyrolysis-GC/MS, and synchronous fluorescence spectroscopy together with microarray analyses screening 12,214 gene models, de...
ORGANISM(S): Paxillus involutus 
2012-02-01 | E-GEOD-34402 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Entamoeba histolytica trophozoites in mid-logarithmic growth
Entamoeba histolytica is a protozoan parasite which causes colitis and liver abscesses. Using a genomic DNA microarray consisting of 1.6 - 2.0 kb genomic inserts we have generated a transcriptional profile of 1,971 unique parasite transcripts. The 12 arrays in this experiment set were used to esti...
ORGANISM(S): Entamoeba histolytica 
2005-07-06 | E-SMDB-3205 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Entamoeba histolytica plus Caco2 cells
Entamoeba histolytica is a protozoan parasite which causes colitis and liver abscesses. Using a genomic DNA microarray consisting of 1.6 - 2.0 kb genomic inserts we have generated a transcriptional profile of 1,971 unique parasite transcripts. The arrays in this experiment set were used to examine...
ORGANISM(S): Entamoeba histolytica 
2005-07-06 | E-SMDB-3208 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Entamoeba histolytica trophozoites heat shock experiments
Entamoeba histolytica is a protozoan parasite which causes colitis and liver abscesses. A pilot microarray consisting of 360 unique parasite genes was constructed using identical methods to the larger array (1,971 unique genes). The four arrays in this data set were used to ascertain whether the m...
ORGANISM(S): Entamoeba histolytica 
2005-07-06 | E-SMDB-3207 | biostudies-arrayexpress
TranscriptomicsCarbon availability triggers the decomposition of plant litter and assimilation of nitrogen by an ectomycorrhizal fungus
Abstract: A large part of the nitrogen in forest soils is found in recalcitrant organic matter-protein complexes. Ectomycorrhizal fungi are thought to have a key role in the decomposition and mobilization of nitrogen from such complexes. The knowledge on the functional mechanisms of these processes,...
ORGANISM(S): Paxillus involutus ATCC 200175 
2013-04-30 | E-GEOD-45303 | biostudies-arrayexpress
TranscriptomicsTranscriptomic comparison of osteocyte cell lines – determining their utility as models to study sex hormone regulation of skeletal function
Comparions of transcriptomes of two osteocyte cell lines under conditions that increase and decrease androgens. To study gene expression differences and the cell lines' appropriateness for studying androgen regulation of skeletal function
ORGANISM(S): Mus musculus 
2026-09-01 | E-MTAB-16564 | biostudies-arrayexpress
TranscriptomicsA Liver Hepcidin-Intestinal HIF-2α Axis Regulates Iron Absorption During Systemic Iron Deficiency, Hypoxia and Hemochromatosis
Iron-related disorders are among the most prevalent diseases worldwide. Systemic iron homeostasis requires hepcidin (Hamp), a hepatic-derived hormone that controls iron mobilization through its molecular target, ferroportin (FPN), the only known mammalian iron exporter. Here, we took a transcriptomi...
ORGANISM(S): Mus musculus 
2018-12-12 | E-MTAB-7329 | biostudies-arrayexpress
UnknownOptical Nanosensor for Intracellular and Intracranial Detection of Amyloid-Beta.
Not available
S-EPMC9710299 | biostudies-literature
TranscriptomicsmodENCODE_White Lab: genome-wide ChIP-chip and ChIP-Seq data
For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Drosophila melanogaster 
2010-08-11 | E-GEOD-23537 | biostudies-arrayexpress
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