Shao Liang L - OmicsDI

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Unknown (416)
Transcriptomics (35)
Genomics (11)
Proteomics (7)
Metabolomics (5)

Organisms

Homo sapiens (30)
Mus musculus (5)
Rattus norvegicus (3)
Arabidopsis thaliana (3)
Gallus gallus (2)
Drosophila melanogaster (2)
Cynoglossus semilaevis (1)
Urocitellus parryii (1)
Neisseria meningitidis (1)
Zea mays (1)
Caenorhabditis elegans (1)
Saccharomyces cerevisiae (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Capra hircus (1)

Repository

biostudies-arrayexpress (41)
iProX (6)
EGA (5)
MetaboLights (5)
pride (1)

Technology Type

Mass spectrometry (4)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Bottom-up proteomics (1)
Data-dependent acquisition (1)
Mass Spectrometry (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (2)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 4000 (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating – hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2016 (9)
2015 (8)
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2010 (5)
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2012 (2)
2009 (2)
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2011 (1)
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2020 (1)

CHEBI ID

CHEBI:16359 (3)
CHEBI:16811 (3)
CHEBI:17368 (3)
CHEBI:18237 (3)
CHEBI:25094 (3)
CHEBI:26271 (3)
CHEBI:27897 (3)
CHEBI:28044 (3)
CHEBI:28300 (3)
CHEBI:29016 (3)
CHEBI:15354 (2)
CHEBI:15355 (2)
CHEBI:15366 (2)
CHEBI:15611 (2)
CHEBI:15688 (2)
CHEBI:15724 (2)
CHEBI:15741 (2)
CHEBI:15891 (2)
CHEBI:16236 (2)
CHEBI:16449 (2)
CHEBI:16704 (2)
CHEBI:16737 (2)
CHEBI:16750 (2)
CHEBI:16919 (2)
CHEBI:17012 (2)
CHEBI:17126 (2)
CHEBI:17568 (2)
CHEBI:17596 (2)
CHEBI:17650 (2)
CHEBI:17750 (2)

Metabolite Name

Acetoin (2)
Arginine (2)
Asparagine (2)
Creatine (2)
Ethanol (2)
Guanosine (2)
Hypoxanthine (2)
Inosine (2)
Isoleucine (2)
Proline (2)
Taurine (2)
Tryptophan (2)
(+)-2-Bornanone (1)
(-)-3-Cyanomethyl-3-hydroxy-1H-indol-2(3H)-one (1)
(-)-Borneol (1)
(-)-Menthone (1)
(1R)-2,6,6-Trimethylbicyclo[3.1.1]hept-2-ene (1)
(5-L-Glutamyl)-L-glutamine (1)
1,2,4-triazines (1)
1,2-Benzenedicarboxylic acid, bis(2-methylpropyl) ester (1)
1,4-benzodiazepines (1)
1-Arachidonoylglycerophosphoinositol (1)
1-Butanol (1)
1-Butene, 4-isothiocyanato- (1)
1-Decanol (1)
1-Hexadecanol (1)
1-Hexanol (1)
1-Methylhistidine (1)
1-Methylnicotinamide (1)
1-Nonanol (1)

Study type

Transcription profiling by array (18)
RNA-seq of coding RNA (9)
ChIP-seq (4)
RNA-seq of non coding RNA (3)
ChIP-chip by tiling array (2)
Methylation profiling by high throughput sequencing (2)
Unknown experiment type (1)
Transcription profiling by RT-PCR (1)
Methylation profiling by array (1)

Release Date

2025 (81)
2022 (62)
2023 (53)
2024 (38)
2020 (37)
2021 (33)
2019 (27)
2017 (21)
2018 (21)
2016 (18)
2015 (17)
2026 (14)
2014 (13)
2013 (10)
2010 (5)
2012 (3)
2009 (2)
2011 (1)
2008 (1)

Lab affiliation

Department of Hepatobiliary and Pancreatic Surgery, the First Affiliated Hospital, Zhejiang University School of Medicine (1)

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Cell cycle dependent nucleosome occupancy at cohesin binding sites in yeast chromosomes

Nucleosome organization determines local chromatin structure and changes in nucleosome occupancy during the cell cycle are correlated with nuclear functions. We used oligonucleotide tiling arrays to analyze the cell cycle dependence of nucleosome occupancy at cohesin binding sites in yeast chromosom...

ORGANISM(S): Saccharomyces cerevisiae

2010-05-26 | E-GEOD-8130 | biostudies-arrayexpress

Human DNA ligases I and III, but not ligase IV, are required for microhomology-mediated end joining of DNA double-strand breaks.

Not available

S-EPMC2425475 | biostudies-literature

Coordinate Regulation of Metabolites Glycosylation and Stress Hormones Biosynthesis by TT8 in Arabidopsis

Secondary metabolites play a key role in coordinating ecology and defense strategies of plants. Diversity of these metabolites arise by conjugation of core structures with diverse chemical moieties, such as sugars in glycosylation. Active pools of phytohormones, including those involved in plant str...

ORGANISM(S): Arabidopsis thaliana

2016-07-20 | E-GEOD-59048 | biostudies-arrayexpress

Comparative Metabolome and Transcriptome Analysis of Anthocyanin Biosynthesis in White and Pink Petals of Cotton (Gossypium hirsutum L.).

Not available

S-EPMC9456042 | biostudies-literature

Independent Regulation of Metabolism but Coordinated Control of Tissue Development by Epidermal Specific Transcription Factors in Caenorhabditis elegans

We identified target genes for NHR-25 by ChIP-seq at L1 stage of C. elegans. Transcription factor genes were tagged with GFP and their expression examined at L1 stage. Since there are no direct target genes known for NHR-25 that can be used for assessment of enrichment efficiency by quantitative PCR...

ORGANISM(S): Caenorhabditis elegans

2013-12-03 | E-GEOD-44710 | biostudies-arrayexpress

Research on Physiological Characteristics and Differential Gene Expression of Rice Hybrids and Their Parents under Salt Stress at Seedling Stage.

Not available

S-EPMC10934706 | biostudies-literature

Impact of selenium status and supplementation on outcomes in critically ill patients.

Not available

S-EPMC12514163 | biostudies-literature

Association of serum complement C1q with cardiovascular outcomes among patients with acute coronary syndrome undergoing percutaneous coronary intervention

Not available

S-EPMC9807401 | biostudies-literature

Predictive value of bedside lung ultrasound, quantitative chest CT, and frailty assessment for short-term outcomes in elderly patients with severe pneumonia: a pilot study.