Sharp S S - OmicsDI

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Transcriptomics (203)
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Homo sapiens (94)
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Hordeum vulgare (2)
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Oncorhynchus nerka (1)
Mustela putorius furo (1)
Boreogadus saida (1)
Geospiza magnirostris (1)
Synechocystis sp. PCC 6803 (1)

Organisms

Homo sapiens (4)
Saccharomyces cerevisiae (2)
Mus musculus (2)
Pinus radiata (1)
Staphylococcus epidermidis RP62A (1)
Corynebacterium glutamicum (1)
mine drainage metagenome (1)
Synechocystis sp. PCC 6803 (1)
hot springs metagenome (1)

Repository

biostudies-arrayexpress (217)
pride (58)
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geo (7)
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Tissue

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Disease

Breast cancer (4)
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Irritable bowel syndrome (1)
Non-small cell lung carcinoma (1)
Oculopharyngeal muscular dystrophy (1)
Prostate cancer (1)
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Wounds and Injuries (1)

Technology Type

Mass Spectrometry (58)
Shotgun proteomics (33)
Bottom-up proteomics (10)
Mass spectrometry (9)
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Gel-based experiment (6)
Data-independent acquisition (5)
SWATH MS (5)
Illumina HiSeq 2000 (2)
NMR spectroscopy (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2500, ILLUMINA (1)
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SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (8)
Illumina HiSeq 2500 (4)
Liquid Chromatography MS - positive - reverse phase (4)
NextSeq 550 (3)
Illumina HiSeq 4000 (3)
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Scanning hardware (1)
- (1)
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NextSeq 500 (1)
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Direct infusion MS - negative (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - reverse-phase (1)

Publication Date

2015 (34)
2014 (29)
2010 (28)
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2020 (7)
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2017 (5)
2009 (4)
2004 (3)
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CHEBI ID

CHEBI:18211 (3)
CHEBI:18237 (3)
CHEBI:30769 (3)
CHEBI:7916 (3)
CHEBI:134270 (2)
CHEBI:15741 (2)
CHEBI:15940 (2)
CHEBI:16113 (2)
CHEBI:16196 (2)
CHEBI:16449 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16857 (2)
CHEBI:17568 (2)
CHEBI:17821 (2)
CHEBI:18186 (2)
CHEBI:18257 (2)
CHEBI:25017 (2)
CHEBI:27266 (2)
CHEBI:28044 (2)
CHEBI:28300 (2)
CHEBI:32816 (2)
CHEBI:37024 (2)
CHEBI:64424 (2)
CHEBI:64517 (2)
CHEBI:66849 (2)
CHEBI:66850 (2)
CHEBI:71731 (2)
CHEBI:71736 (2)
CHEBI:113542 (1)

Metabolite Name

Pantothenic acid (3)
Adenine (2)
Aminoadipic acid (2)
Citrulline (2)
Glutamine (2)
Leucine (2)
Nicotinic acid (2)
Oleic acid (2)
Ornithine (2)
PI(40:7) (2)
Phenylalanine (2)
Succinic acid (2)
Thymine (2)
Uracil (2)
Uric acid (2)
Uridine (2)
Valine (2)
Xanthine (2)
(S)-2,3,4,5-tetrahydropyridine-2-carboxylate (1)
(S)-5-Amino-3-oxohexanoate (1)
1-Aminocyclopropanecarboxylic acid (1)
1-Methylnicotinamide (1)
13-keto-1,11-dolabell-3(E),7(E),12(18)-triene (1)
2-Hydroxy-2-ethylsuccinic acid (1)
2-Hydroxybutyric acid (1)
2-methoxy-3-(1-methylpropyl) pyrazine (1)
25-Hydroxycholesterol (1)
3-(2-Hydroxyphenyl)propanoic acid (1)
4,5-Dihydroorotic acid (1)
4-Hydroxyphenylacetaldehyde (1)

IsPrivate

False (2)

First Public Date

2014 (6)
2026 (3)
2025 (2)
2024 (2)
2023 (2)
2022 (2)
2021 (2)
2017 (2)
2020 (1)
2019 (1)
2018 (1)
2015 (1)
2013 (1)

Classification

bacteria (1)

Modelling Approach

Ordinary differential equation model (2)

Study type

Transcription profiling by array (130)
RNA-seq of coding RNA (34)
ChIP-seq (18)
Unknown experiment type (8)
RNA-seq of non coding RNA (5)
Methylation profiling by array (4)
ChIP-chip by tiling array (3)
Other (3)
RNA-seq of coding RNA from single cells (3)
Comparative genomic hybridization by array (2)
Transcription profiling by MPSS (1)
Human - High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
ATAC-seq (1)
RIP-seq (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (557)
2025 (526)
2023 (519)
2021 (499)
2024 (443)
2020 (413)
2018 (323)
2019 (309)
2017 (220)
2015 (184)
2016 (175)
2014 (164)
2026 (95)
2013 (89)
2012 (88)
2011 (74)
2010 (73)
2008 (55)
2009 (38)
2007 (23)
2005 (16)
2006 (13)
2004 (12)
2003 (10)
2002 (5)
2000 (4)
2001 (3)
1997 (3)
1999 (2)
1998 (2)

Lab affiliation

University of Mississippi (4)
Division of Surgery, Oncology, and Pathology, Department of Clinical Sciences. Biomedical Center – Lund University, Solvegatan 19, 223 62, Lund, Sweden (2)
German Cancer Research Center Heidelberg University Clinic Heidelberg (2)
ICM, Molecular Evolution, Uppsala University (2)
Acupuncture-moxibustion and Orthopedic College, Hubei University of Chinese Medicine, Wuhan, China (1)
Advanced Technology Walter & ELiza Hall Institute (1)
Barts Cancer Institute (1)
Center for Molecular Biology of Heidelberg University (ZMBH), 69120 Heidelberg, Germany (1)
Center for Proteomics & Artificial Intelligence Center for Clinical Mass Spectrometry Allegheny Health Network Cancer Institute 100 S Jackson Ave., Pittsburgh, PA 15202 (1)
Center for Proteomics and Metabolomics, LUMC, Leiden, The Netherlands (1)
Center for Proteomics and Metabolomics, Leiden University Medical Center, 2333 ZA, Leiden, The Netherlands (1)
Center for Proteomics and Metabolomics, Leiden University Medical Center, Leiden, The Netherlands (1)
Center of Regenerative Medicine in Barcelona (CMRB) (1)
Central Diagnostic Laboratory Maastricht University Medical Centre Maastricht, the Netherlands (1)
College of Pharmacy, Kyungpook National University (1)
Department of Basic and Clinical Neuroscience, The Maurice Wohl Clinical Neuroscience Institute, Institute of Psychiatry, Psychology, & Neuroscience, King’s College London, London, UK (1)
Department of Biochemistry and Molecular Biology, Drexel University College of Medicine. Translational Cellular Oncology Program, Sidney Kimmel Cancer Center, Thomas Jefferson University (1)
Department of Biological Chemistry, McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA (1)
Department of Biomolecular Sciences University of Mississippi (1)
Department of Biotechnology, Delft University of Technology, The Netherlands. (1)
Department of Chemical Engineering, Department of Bioengineering, University of California, Santa Barbara, USA (1)
Department of Genome Sciences, University of Washington (1)
Department of Geoscience, University of Calgary (1)
Department of Geoscience, University of Calgary, Calgary Ab, Canada (1)
Department of Medical Biophysics and Biochemistry, Karolinska Institutet (1)
Director Glycoscience Center of Research Excellence (GlyCORE) Associate Professor of Pharmacology Associate Professor of Chemistry and Biochemistry The University of Mississippi School of Pharmacy Department of BioMolecular Sciences P.O. Box 1848 445 Faser Hall University, MS 38677-1848 (1)
Division of Proteomics of Stem Cells and Cancer, German Cancer Research Center, Heidelberg, Germany (1)
Evolution and Specificity of Multitrophic Interactions (ESIM) Sophia Agrobiotech Institute (ISA) INRAE / CNRS/ Université de Nice 400 route des Chappes BP 167 06903 Sophia Antipolis Cedex - France (1)
Evolutionary and translational venomics Lab, Instituto de Biomedicina de Valencia, CSIC (1)
Experimental Systems Immunology Laboratory, Max-Planck Institute of Biochemistry, Martinsried, Germany. (1)

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N and S regulation of wheat storage protein accumulation

Seed storage proteins (SSP) play a central role in providing carbon (C), nitrogen (N), and sulfur (S) resources during seed germination. Their content and composition are essential determinants shaping wheat end-use value. Molecular mechanisms underlying the developmental and nutritional regulation ...

ORGANISM(S): Triticum aestivum

2015-06-15 | E-MTAB-1782 | biostudies-arrayexpress

Structural and mechanistic investigations of protein S-glycosyltransferases.

Not available

S-EPMC8688163 | biostudies-literature

S-map parameters for APSIM.

Not available

S-EPMC8861821 | biostudies-literature

Phase IIb study of pembrolizumab combined with S-1 + oxaliplatin or S-1 + cisplatin as first-line chemotherapy for gastric cancer.

Not available

S-EPMC9357620 | biostudies-literature

The frontal sharp transient in newborns: An endogenous neurobiomarker concomitant to the physiological and critical transitional period around delivery?

Not available

S-EPMC10068298 | biostudies-literature

short-term effect of N and S supply shifts on gene expression in wheat grain

Nitrogen and Sulfur supply play an important role in modulating wheat grain development. We studied the short-term effect of shifting N and S supply levels at mid-way through grain filling on gene expression by microarray analysis. Please note: Factor Value[sampling time]: indicates when the samples...

ORGANISM(S): Triticum aestivum

2015-06-01 | E-MTAB-1920 | biostudies-arrayexpress

A Bi-Directional Acoustic Micropump Driven by Oscillating Sharp-Edge Structures.

Not available

S-EPMC10146208 | biostudies-literature

Bacterial response to sharp geochemical gradients caused by acid mine drainage intrusion

Bacterial response to sharp geochemical gradients caused by acid mine drainage intrusion Raw sequence reads

PRJNA576319 | ENA

Burden of sequelae and healthcare resource utilization in the first year of life in infants born with congenital cytomegalovirus (cCMV) infection in Germany: A retrospective statutory health insurance claims database analysis.

Not available

S-EPMC10653416 | biostudies-literature

Sharp changes in gene expression levels along germinal layers distinguish the development of gyrencephaly

Gyrencephalic species develop folds in the cerebral cortex in a stereotypic manner, but the genetic mechanisms underlying this unique patterning process are unknown. We present a large-scale transcriptomic analysis of individual germinal layers in the developing cortex of the gyrencephalic ferret, c...

ORGANISM(S): Mustela putorius furo

2015-05-21 | E-GEOD-60687 | biostudies-arrayexpress

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