Shen Bo B - OmicsDI

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Unknown (74)
Proteomics (23)
Metabolomics (16)
Multiomics (3)
Transcriptomics (2)
Genomics (2)
Other (1)

Organisms

Homo sapiens (14)
Mycobacterium tuberculosis SP7 (8)
Mycobacterium tuberculosis SP10 (8)
Mycobacterium tuberculosis SP13 (8)
Mycobacterium tuberculosis SP22 (8)
Chlamydomonas reinhardtii (8)
Enterococcus mundtii CRL35 (8)
Oncorhynchus tshawytscha (8)
Pseudomonas canadensis (8)
Pseudomonas aeruginosa PAO1H2O (8)
Human alphaherpesvirus 1 strain 17 (8)
Mycobacterium tuberculosis SP1 (8)
Marchantia polymorpha subsp. ruderalis (8)
Methylocystis sp. (8)
Exiguobacterium sp. SH31 (8)
Palaemonetes sp. common grass shrimp associated circular virus (8)
Amaranthus tricolor (8)
Spirochaeta sp. ELBA (8)
Clavibacter nebraskensis NCPPB 2581 (8)
Porites pukoensis (8)
Porphyromonas gingivalis (8)
Leishmania tarentolae (8)
Porphyromonas gingivalis W83 (8)
Human betaherpesvirus 5 (8)
Bothrops insularis (8)
Bothrops jararaca (8)
Bothrops jararacussu (8)
Oryza sativa (1)
Solanum tuberosum (1)
Drosophila melanogaster (1)

Repository

MetaboLights (14)
iProX (10)
pride (8)
biostudies-arrayexpress (3)
PeptideAtlas (3)
GNPS (2)
MassIVE (2)
EGA (1)
GPMDB (1)

Tissue

Cell culture (4)
Others (3)
Fungal cell (2)
Testis (2)
Kidney cell (1)

Disease

Not Available (1)
Fungal infectious disease (1)

Technology Type

Mass spectrometry (12)
Mass Spectrometry (8)
Shotgun proteomics (4)
Mass spectrometry assay (2)
Data-dependent acquisition (2)
Bottom-up proteomics (2)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (8)
Liquid Chromatography MS - negative - reverse phase (3)
TripleTOF 6600 (2)
Q Exactive HF (2)
6540 Q-TOF LC/MS (Agilent) (2)
LTQ Orbitrap Elite (2)
Instrument (1)
TSQ Quantum GC (Thermo Scientific) (1)
Xevo QTof MS (Waters) (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - positive - hilic (1)
QExactive (1)

Publication Date

2020 (7)
2023 (6)
2026 (6)
2016 (4)
2025 (3)
2024 (3)
2014 (3)
2021 (2)
2019 (2)
2022 (2)
2015 (1)
2012 (1)
2018 (1)

UNIPROT ID/AC

Q6ZVE7 (3)
Q99619 (3)
Q8N4U5 (3)
Q9UBZ4 (3)
Q96QP1 (3)
Q9Y576 (3)
Q6ZTQ3 (3)
Q9H633 (3)
Q96PC5-2 (3)
Q96PC5 (3)
Q8TDW5 (3)
Q9NXZ2 (3)
Q8IZP6 (3)
Q9UHA2 (3)
Q6MZQ0 (3)
Q9C019 (3)
Q96EP1 (3)
Q8IYM2 (3)
Q86SJ2 (3)
Q02833 (3)
O43194 (3)
Q9Y2C3 (3)
O00338 (3)
Q6NSJ2 (3)
Q17R98 (3)
Q9Y664 (3)
Q9UNP4 (3)
Q96BZ9 (3)
Q8WUA8 (3)
Q3MII6 (3)

ENSEMBL ID

ENSG00000247315 (3)
ENSG00000147251 (3)
ENSG00000170477 (3)

CHEBI ID

CHEBI:16359 (5)
CHEBI:17015 (4)
CHEBI:18344 (4)
CHEBI:27432 (4)
CHEBI:182784 (3)
CHEBI:35038 (3)
CHEBI:81321 (3)
CHEBI:36090 (3)
CHEBI:38257 (3)
CHEBI:64032 (3)
CHEBI:17822 (3)
CHEBI:16811 (3)
CHEBI:28300 (3)
CHEBI:16708 (3)
CHEBI:73858 (3)
CHEBI:16750 (3)
CHEBI:16870 (3)
CHEBI:34494 (3)
CHEBI:16610 (3)
CHEBI:16551 (3)
CHEBI:28044 (3)
CHEBI:17154 (3)
CHEBI:16566 (3)
CHEBI:116314 (3)
CHEBI:16393 (3)
CHEBI:17620 (3)
CHEBI:16235 (3)
CHEBI:16335 (3)
CHEBI:17568 (3)
CHEBI:17509 (3)

Metabolite Name

Tris(2-butoxyethyl) phosphate (3)
Cholic acid (3)
Dibutyl phthalate (DBP) (2)
Lyso-PC(16:0) (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
Palmitoleic acid (2)
9,10-DiHODE (2)
Glutamylleucine (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
12-amino-dodecanoic acid (2)
Galactose (2)
Glycine (2)
Uracil (2)
Genistein (2)
Glucosamine (2)
Taurocholic acid (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
Trans-EKODE-(E)-Ib (2)
Monoolein (2)
Nicotinamide (2)
Methionine (2)
Elaidic acid (2)
9(10)-EpOME (2)
Serine (2)
Adenosine (2)
Spermidine (2)
Guanine (2)

Modification

15.994915 (1)
57.021464 (1)

Study type

ChIP-seq (1)
Transcription profiling by array (1)
RNA-seq of coding RNA (1)

Release Date

2022 (12)
2021 (10)
2025 (9)
2016 (9)
2023 (7)
2024 (6)
2020 (5)
2017 (5)
2012 (4)
2019 (3)
2015 (2)
2011 (2)
2018 (1)
2013 (1)
2009 (1)

Lab affiliation

State Key Laboratory of Green Pesticide, College of Chemistry, Central China Normal University, Wuhan 430079, China (1)
State Key Laboratory of Green Pesticide, College of Chemistry, Central China Normal University, Wuhan 430079, China. (1)
The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou Municipal Hospital,Suzhou 215002, China (1)
Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Science, Xujiaping No.1, Lanzhou, Gansu, 730046 (1)
BGI-Shenzhen (1)
State Key Laboratory of Reproductive Medicine and Offspring Health, Center for Reproduction and Genetics, The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou Municipal Hospital, Gusu School, Nanjing Medical University, Suzhou 215002, China (1)
State Key Laboratory of Reproductive Medicine and Offspring Health, Center for Reproduction and Genetics, The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou Municipal Hospital, Gusu School, Nanjing Medical University, Suzhou 215002, China. (1)
State Key Laboratory of Reproductive Medicine and Offspring Health, Center for Reproduction and Genetics, The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou Municipal Hospital, Gusu School of Nanjing Medical University, Suzhou 215002, China (1)

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Efficient ternary organic solar cells with suppressed nonradiative recombination via B‒N based polymer donor.

Not available

S-EPMC11761936 | biostudies-literature

Genome-wide analysis of microRNAs and their targets involving in leaf senescence of rice

Enhancing grain production of rice (Oryza sativa L.) is a top priority in ensuring food security for human being. One approach to increase yield is to delay leaf senescence and to extend the available time for photosynthesis. microRNAs (miRNAs) are key regulators for aging and cellular senescence in...

ORGANISM(S): Oryza sativa

2015-01-01 | E-GEOD-62200 | biostudies-arrayexpress

Synergistic protection of tetramethylpyrazine phosphate and borneol on brain microvascular endothelium cells injured by hypoxia.

Not available

S-EPMC6511760 | biostudies-literature

Tetramethylpyrazine phosphate and borneol combination therapy synergistically attenuated ischemia-reperfusion injury of the hypothalamus and striatum via regulation of apoptosis and autophagy in a rat model.

Not available

S-EPMC5714767 | biostudies-literature

Landscape of surgery in Crohn's disease across twenty years: insights from machine learning.

Not available

S-EPMC11535804 | biostudies-literature

Left colic artery diameter is an important factor affecting anastomotic blood supply in sigmoid colon cancer or rectal cancer surgery: a pilot study.

Not available

S-EPMC9513983 | biostudies-literature

From genes to reproductive health: Immune cell influences on abortion.

Not available

S-EPMC11466425 | biostudies-literature

Quantitative proteomics reveals the essential roles of STIM1 in the testicular cord formation in mouse testis.

Data from ProteomeXchange, PXD ID: PXD002563. Experiment: group1, file: folder summary. Published as part of Mol Cell Proteomics. 2015 Jul 21 . From the Abstract: {{i}} Testicular cord formation in male gonadogenesis involves assembly of several cell types, the precise molecular mechanism is still ...

ORGANISM(S): Mus_musculus_viruses, Mouse

GPM32320017393 | GPMDB

Resource Reanalysis

Inhibiting Mrt4-rRNA interaction with fumaramidmycin-based derivatives as an unexploited antifungal strategy

The rise of drug resistance and limitations of current antifungal treatments highlight the urgent need for innovative antifungal strategies. Here we present the development of cis-fumaramidmycin-derived analogues as a novel chemotype inhibiting the interactions of ribosome assembly factor Mrt4 with ...

ORGANISM(S): Candida albicans (Yeast)

2026-04-27 | PXD068797 | Pride

Invasive fungal infections Protein-rna interaction covalent inhibitors Fumaramidmycin derivatives Ribosome assembly factor mrt4 Antifungal target identification

One-step-one-pot hydrothermally derived metal-organic-framework-nanohybrids for integrated point-of-care diagnostics of SARS-CoV-2 viral antigen/pseudovirus utilizing electrochemical biosensor chip.

Not available

S-EPMC10170875 | biostudies-literature

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118 Results

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