Shi Du D - OmicsDI

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Unknown (856)
Transcriptomics (20)
Proteomics (12)
Metabolomics (5)
Genomics (3)

Organisms

Homo sapiens (14)
Mus musculus (8)
Caenorhabditis elegans (2)
Brassica oleracea (1)
Macaca mulatta (1)
Oryza sativa Japonica Group (1)
Gallus gallus (1)
Rattus norvegicus (1)
Drosophila melanogaster (1)
Danio rerio (1)
Sus scrofa domesticus (1)
'Solanum lycopersicum' phytoplasma (1)
Chlorocebus aethiops (1)
Eriocheir sinensis (1)

Repository

biostudies-arrayexpress (22)
pride (9)
MetaboLights (5)
iProX (3)
EGA (1)

Tissue

Whole body (2)
Cell culture (1)
Heart (1)
Liver (1)
Lung (1)
Lung cancer cell line (1)
Permanent cell line cell (1)
Prostate gland (1)
Root (1)
Semen (1)
Small intestine (1)
Spleen (1)
Testis (1)

Disease

Cervix carcinoma (1)

Technology Type

Mass Spectrometry (9)
Mass spectrometry (5)
Shotgun proteomics (4)
Affinity purification coupled with mass spectrometry proteomics (3)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-dependent acquisition (1)
Gel-based experiment (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - alternating – hilic (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2014 (7)
2023 (5)
2024 (4)
2016 (3)
2011 (3)
2015 (2)
2013 (2)
2012 (2)
2010 (2)
2021 (2)
2025 (2)
2008 (1)
2005 (1)
2020 (1)
2022 (1)
2019 (1)

CHEBI ID

CHEBI:28834 (3)
CHEBI:1157 (2)
CHEBI:116314 (2)
CHEBI:15724 (2)
CHEBI:15756 (2)
CHEBI:15901 (2)
CHEBI:16196 (2)
CHEBI:16335 (2)
CHEBI:16359 (2)
CHEBI:165576 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16737 (2)
CHEBI:16962 (2)
CHEBI:16974 (2)
CHEBI:17154 (2)
CHEBI:17351 (2)
CHEBI:17368 (2)
CHEBI:17509 (2)
CHEBI:17568 (2)
CHEBI:17626 (2)
CHEBI:17748 (2)
CHEBI:17750 (2)
CHEBI:17992 (2)
CHEBI:18295 (2)
CHEBI:18300 (2)
CHEBI:25094 (2)
CHEBI:26078 (2)
CHEBI:27781 (2)
CHEBI:28104 (2)

Metabolite Name

9,10-DHOME (2)
Creatinine (2)
Deoxycholic acid (2)
Hypoxanthine (2)
Sinapyl alcohol (2)
(+)-Catechin (1)
(+)-Gallocatechin (1)
(-)-3-Cyanomethyl-3-hydroxy-1H-indol-2(3H)-one (1)
(-)-Epicatechin (1)
(5-L-Glutamyl)-L-glutamine (1)
(R)-3-Hydroxybutyric acid (1)
(ÃÂ±)-2-(1-Methylpropyl)-4,6-dinitrophenol (1)
1,3,5-Trihydroxybenzene (1)
1-Arachidonoylglycerophosphoinositol (1)
1-Methylhistidine (1)
1-Methylnicotinamide (1)
10E,12Z-Octadecadienoic acid (1)
12-Hydroxydodecanoic acid (1)
12-Oxo-2,3-dinor-10,15-phytodienoic acid (1)
15-Keto-13,14-dihydroprostaglandin A2 (1)
15-Keto-prostaglandin E2 (1)
16-Hydroxy hexadecanoic acid (1)
16-Methylheptadecanoic acid (1)
1H-Indole-2,3-dione (1)
1H-Indole-3-carboxaldehyde (1)
2,2-Dimethylsuccinic acid (1)
2,3-Dihydroxybutanedioic acid (1)
2-(3,4-Dihydroxybenzoyloxy)-4,6-dihydroxybenzoate (1)
2-Deoxycastasterone (1)
2-Hydroxyethanesulfonate (1)

Modification

57.021464 (1)

Study type

Transcription profiling by array (11)
RNA-seq of coding RNA (6)
ChIP-seq (2)
Transcription profiling by SAGE (1)
Comparative genomic hybridization by array (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (143)
2024 (105)
2023 (105)
2022 (105)
2021 (86)
2020 (68)
2019 (48)
2018 (37)
2017 (36)
2016 (32)
2014 (25)
2015 (21)
2026 (17)
2013 (14)
2012 (11)
2011 (10)
2010 (7)
2005 (3)
2009 (2)
2008 (1)
2007 (1)
2003 (1)

Lab affiliation

Center of Reproductive Medicine, Shengjing Hospital of China Medical University, Shenyang 110004, China; (1)
Department of Biochemistry and Molecular Biology, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei 430032, China (1)
Department of Cardiology, Shanghai East Hospital, Tongji University School of Medicine, No. 150 Jimo Road, Shanghai 200120, China. (1)
Department of Chemistry, Brandeis University, US (1)
Huazhong University of Science and Technology (1)
Ningbo University (1)
Peking University Institute of Advanced Agricultural Sciences, Shandong Laboratory of Advanced Agricultural Sciences at Weifang, Weifang, 261000, China (1)
School of Medicine, Shanghai University, Shanghai 200444, China. (1)
The Institute of Cancer Research (1)

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Real-World Study on Chai-Shi-Jie-Du Granules for the Treatment of Dengue Fever and the Possible Mechanisms Based on Network Pharmacology.

Not available

S-EPMC10482559 | biostudies-literature

Gan-du-qing attenuates PM<sub>2.5</sub>-induced Chronic Airway Inflammation via regulating the pulmonary microbiota and metabolic profiles.

Not available

S-EPMC12457115 | biostudies-literature

D-amino acids modulate the cellular response of enzymatic-instructed supramolecular nanofibers of small peptides.

Not available

S-EPMC4195520 | biostudies-literature

MAQC-II Project: human breast cancer (BR) data set

The human breast cancer (BR) data set (endpoints D and E) was contributed by the University of Texas M. D. Anderson Cancer Center (MDACC, Houston, TX, USA). Gene expression data from 230 stage I-III breast cancers were generated from fine needle aspiration specimens of newly diagnosed breast cancers...

ORGANISM(S): Homo sapiens

2010-02-04 | E-GEOD-20194 | biostudies-arrayexpress

Vitamin D treatment attenuates 2,4,6-trinitrobenzene sulphonic acid (TNBS)-induced colitis but not oxazolone-induced colitis.

Not available

S-EPMC5020649 | biostudies-literature

Systems pharmacological study illustrates the immune regulation, anti-infection, anti-inflammation, and multi-organ protection mechanism of Qing-Fei-Pai-Du decoction in the treatment of COVID-19.

Not available

S-EPMC7480398 | biostudies-literature

Genetic evidence supporting the causal role of 25-hydroxyvitamin D levels in the prognosis of ER- breast cancer: A Mendelian randomization study.

Not available

S-EPMC11521050 | biostudies-literature

In situ generated D-peptidic nanofibrils as multifaceted apoptotic inducers to target cancer cells.