Shi Yang Y - OmicsDI

Show results for

Unknown (8441)
Proteomics (214)
Transcriptomics (62)
Metabolomics (28)
Genomics (18)

Organisms

Homo sapiens (92)
Mus musculus (46)
Macaca mulatta (3)
Oryza sativa (2)
Arabidopsis thaliana (2)
Severe acute respiratory syndrome coronavirus 2 (2)
Rattus rattus (2)
Pteropus alecto (1)
Bos grunniens (1)
Brassica oleracea (1)
Arachis hypogaea (1)
Bemisia tabaci (1)
Drosophila simulans (1)
Oryza sativa Indica Group (1)
Setaria italica (1)
Caenorhabditis elegans (1)
Aeromonas hydrophila HS01 (1)
Mycobacterium tuberculosis variant bovis BCG str. Glaxo (1)
Mycobacterium tuberculosis variant bovis BCG str. Korea 1168P (1)
Mycobacterium tuberculosis variant bovis BCG str. China (1)
Mycobacterium tuberculosis variant bovis BCG (1)
Mycobacterium tuberculosis variant bovis BCG str. Phipps (1)
Mycobacterium tuberculosis variant bovis BCG str. Moreau (1)
Mycobacterium tuberculosis variant bovis BCG str. Sweden (1)
Mycobacterium tuberculosis variant bovis BCG str. Tokyo 172 (1)
Mycobacterium tuberculosis variant bovis BCG str. Frappier (1)
Plasmodium yoelii yoelii 17XNL (1)
Phyllostachys edulis (1)
Rasamsonia (1)
Thermomyces (1)

Repository

pride (117)
iProX (90)
biostudies-arrayexpress (76)
MetaboLights (27)
EGA (4)
jPOST (4)
MassIVE (3)
GNPS (1)

Tissue

Cell culture (30)
Brain (16)
Liver (14)
Testis (5)
Hepatocyte (5)
Lung (5)
Whole body (4)
Leaf (4)
Epithelial cell (4)
Oocyte (3)
Bone marrow (3)
Macrophage (3)
Heart (3)
Blood plasma (3)
Permanent cell line cell (3)
Sperm (2)
Gastric adenocarcinoma cell (2)
Stem cell (2)
Photosynthetic cell (2)
T cell (2)
Blood (2)
Sensory ganglion (1)
Regional part of brain (1)
Umbilical cord (1)
Bone tissue (1)
T-cell acute lymphoblastic leukemia cell (1)
Pancreatic cancer cell (1)
Protein (1)
Smooth muscle cell of small intestine (1)
Preadipocyte (1)

Disease

Osteosarcoma (3)
Liver cancer (3)
Disease free (3)
Hepatocellular carcinoma (2)
Cardiovascular system disease (2)
Breast cancer (2)
Acute leukemia (2)
Neuropathic pain (1)
Prion disease (1)
Non-small cell lung carcinoma (1)
Brain glioblastoma multiforme (1)
Gastric adenocarcinoma (1)
Lymphoma (1)
Lung cancer (1)
Melanoma (1)
Pancreatic cancer (1)
Colon cancer (1)

Technology Type

Mass Spectrometry (117)
Shotgun proteomics (52)
Mass spectrometry (25)
Bottom-up proteomics (25)
Gel-based experiment (15)
Data-dependent acquisition (14)
Top-down proteomics (8)
Affinity purification coupled with mass spectrometry proteomics (7)
SWATH MS (5)
Data-independent acquisition (4)
Mass spectrometry assay (2)
RNA mass spectrometry (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Illumina HiSeq 2000 (1)
Proteogenomics (1)
MSE (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (17)
Liquid Chromatography MS - negative - reverse phase (11)
Illumina HiSeq 2000 (2)
6540 Q-TOF LC/MS (Agilent) (2)
Liquid Chromatography MS - positive (2)
Liquid Chromatography MS - negative - hilic (2)
Illumina Genome Analyzer II (1)
Illumina HiSeq 4000 (1)
LTQ FT (1)
MaXis (1)
Orbitrap Fusion (1)
Q Exactive (1)
Q Exactive HF-X (1)
Agilent 7890 (1)
PTR-MS (1)
Tandem Gas Chromatography MS - positive (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2023 (36)
2025 (34)
2022 (33)
2024 (26)
2021 (22)
2015 (15)
2013 (14)
2026 (14)
2014 (13)
2020 (12)
2019 (12)
2012 (11)
2016 (10)
2010 (9)
2018 (6)
2017 (4)
2011 (3)
2009 (1)
2007 (1)
2006 (1)
2005 (1)

CHEBI ID

CHEBI:16335 (10)
CHEBI:17568 (10)
CHEBI:7916 (10)
CHEBI:16704 (10)
CHEBI:30769 (10)
CHEBI:16708 (9)
CHEBI:16750 (9)
CHEBI:17154 (9)
CHEBI:16196 (9)
CHEBI:17509 (9)
CHEBI:16027 (9)
CHEBI:30915 (9)
CHEBI:17596 (9)
CHEBI:28865 (9)
CHEBI:17351 (9)
CHEBI:18344 (9)
CHEBI:17368 (9)
CHEBI:16040 (8)
CHEBI:17533 (8)
CHEBI:16610 (8)
CHEBI:15741 (8)
CHEBI:17015 (8)
CHEBI:17821 (8)
CHEBI:16359 (8)
CHEBI:15756 (8)
CHEBI:64563 (8)
CHEBI:17521 (7)
CHEBI:16113 (7)
CHEBI:17822 (7)
CHEBI:16709 (7)

Metabolite Name

Adenosine (8)
Uracil (7)
Adenine (7)
Guanosine (7)
Uridine (7)
Kynurenic acid (6)
Cholic acid (6)
Riboflavin (6)
Inosine (6)
Tris(2-butoxyethyl) phosphate (5)
Spermidine (5)
Azelaic acid (5)
Thymidine (5)
Creatinine (5)
Creatine (5)
Hypoxanthine (5)
Dibutyl adipate (4)
Genistein (4)
Glucosamine (4)
Thymine (4)
Glutathione (4)
Pilocarpine (4)
Monoolein (4)
Indole (4)
Choline (4)
Taurocholic acid (4)
Melatonin (4)
Serine (4)
Sphinganine (4)
Leucylproline (4)

Study type

Transcription profiling by array (25)
RNA-seq of coding RNA (22)
ChIP-seq (10)
RNA-seq of non coding RNA (5)
Comparative genomic hybridization by array (3)
Methylation profiling by high throughput sequencing (3)
ChIP-chip by array (2)
Genotyping by array (2)
Other (2)
Unknown experiment type (1)
DNA-seq (1)

Release Date

2025 (1459)
2022 (1166)
2024 (1102)
2023 (1076)
2021 (886)
2020 (668)
2019 (416)
2018 (357)
2017 (285)
2016 (244)
2026 (205)
2015 (202)
2014 (145)
2013 (109)
2012 (81)
2011 (46)
2010 (32)
2009 (9)
2007 (8)
2008 (7)
2006 (5)
2005 (3)
2004 (3)
2001 (1)
2000 (1)
1998 (1)

Lab affiliation

Department of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA (6)
Tongji University (4)
Department of Laboratory Medicine, Ren Ji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China. (2)
BCMP, Harvard Medical School, Boston, USA Cancer Biology, Dana-Farber Cancer Institute, Boston, USA (2)
Lab of Jie Zheng, Neuroscience Research Institute and Department of Neurobiology, School of Basic Medical Sciences, Peking University, Beijing 100083, P.R. China (2)
Ningbo University (2)
The First Affiliated Hospital, School of Medicine, Zhejiang University (2)
State Key Laboratory of Reproductive Medicine and Offspring Health， Nanjing Medical University, Nanjing, China. (2)
westlake.edu.cn (2)
State Key Laboratory for Infectious Disease Prevention and Control, Prion disease department, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China (1)
Raymond H. Wittcoff Distinguished Professor and Head Department of Biochemistry and Molecular Biophysics Washington University School of Medicine St. Louis, MO 63110 United States of America (1)
National Key Discipline Laboratory, Department of Nutrition and Food Hygiene, School of Public Health, Harbin Medical University, Harbin, P. R. China (1)
1.Department of Pharmaceutics, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China 2.State Key Laboratory of Natural and Biomimetic Drugs, Beijing 100191, China Beijing Key Laboratory of Molecular Pharmaceutics and New Drug Delivery Systems, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China (1)
nternational Joint Research Center on Cell Stress and Disease Diagnosis and Therapy, National & Local Joint Engineering Research Center of Biodiagnosis and Biotherapy, The Second Affiliated Hospital of Xi’an Jiaotong University, Xi’an, China (1)
1.Department of Pharmaceutics, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China 2.State Key Laboratory of Natural and Biomimetic Drugs, Beijing 100191, China 3.Beijing Key Laboratory of Molecular Pharmaceutics and New Drug Delivery Systems, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China (1)
MOE Laboratory of Biosystem Homeostasis and Protection, College of Life Sciences, Zhejiang University; Hangzhou, Zhejiang, 310058, China (1)
Guangxi Disease Prevention and Control Center (1)
State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211816, P.R. China; (1)
The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, China. (1)
Cancer Science Institute, National University of Singapore, Singapore (1)
State Key Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences & School of Basic Medicine Peking Union Medical College, Beijing 100005, China (1)
shang dong unversity (1)
shang dong university (1)
State Key Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences & School of Basic Medicine Peking Union Medical College, Beijing 100005, China (1)
Shang dong university (1)
State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agroproducts, Key Laboratory of Biotechnology in Plant Protection of MOA of China and Institute of Plant Virology, Ningbo University, Ningbo, 315211, China (1)
Dept of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA (1)
Key Laboratory of Zoonosis Research, Ministry of Education, Institute of Zoonosis/ College of Veterinary Medicine,Jilin University, Changchun, China. (1)
Professor and president of BGI Academy of Marine Sciences (1)
Ping Xu, Ph.D. Secretary General of CNHUPO Department of Genomics and Proteomics, State Key Laboratory of Proteomics, National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics， 38 Life Science Park Road, Beijing 102206, (1)

Previous page
1 / 877
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 877
Next page

Sort by:

Relevance

Page size

Expression data from mouse skeletal muscle

We generated skeletal muscle-specific knockout mice lacking the transcription factor Yin Yang 1 (YY1) and analyzed expression patterns in the skeletal muscle these mice. We used microarrays to detail the global programme of gene expression regulated by YY1. Wild type or knockout mice at 6 months wer...

ORGANISM(S): Mus musculus

2012-06-29 | E-GEOD-39009 | biostudies-arrayexpress

The potential role of short internodes/stylish (SHI/STY) and SHI related sequence (SRS) in potato tuberization.

Not available

S-EPMC12379510 | biostudies-literature

A transcription factor of SHI family AaSHI1 activates artemisinin biosynthesis genes in Artemisia annua.

Not available

S-EPMC11312704 | biostudies-literature

Transcriptomics and metabolomics of engineered Synechococcus elongatus during photomixotrophic growth

BACKGROUND: Converting carbon dioxide (CO2) into value-added chemicals using engineered cyanobacteria is a promising strategy to tackle the global warming and energy shortage issues. However, most cyanobacteria are autotrophic and use CO2 as a sole carbon source, which makes it h...

2022-03-21 | MTBLS2825 | MetaboLights

The transcription factor Yin Yang 1 is essential for oligodendrocyte progenitor differentiation.

Not available

S-EPMC2034312 | biostudies-literature

Yin Yang 1 positively regulates BRCA1 and inhibits mammary cancer formation.

Not available

S-EPMC9421919 | biostudies-literature

Expression analysis of Mycobacterium smegmatis delta-MSMEG_0166 mutant

Investigation of whole genome gene expression level changes in a Mycobacterium smegmatis mc2 155 delta-MSMEG_0166 mutant, compared to the wild-type strain. MSMEG_0166 is a transcriptional regulator in the gntR family. Mutations in MSMEG_0166 result in hypersensitivity to the bactericidal ubiquitin p...

ORGANISM(S): Mycobacterium smegmatis str. MC2 155

2011-01-06 | E-GEOD-26474 | biostudies-arrayexpress

Expression data from mouse CD4+ T cells

Hydrogen sulfide (H2S) is an endogenous gasotransmitter and is capable of regulating various endogenous signaling pathways, inculding inflamation and immune response. In mammals, H2S is mainly generated by two pyridoxal-5’-phosphate-dependent enzymes, termed cystathionine beta-synthase (CBS) and cys...

ORGANISM(S): Mus musculus

2015-07-22 | E-GEOD-59241 | biostudies-arrayexpress

Myeloid PFKFB3-mediated glycolysis promotes kidney fibrosis

Excessive renal fibrosis is a common pathology in progressive chronic kidney diseases. Inflammatory injury and aberrant repair processes contribute to the development of kidney fibrosis. Myeloid cells, particularly monocytes/macrophages, play a crucial role in kidney fibrosis by releasing their proi...

2024-03-12 | MTBLS8278 | MetaboLights

Essential dosage-dependent functions of the transcription factor yin yang 1 in late embryonic development and cell cycle progression.

Not available

S-EPMC1447422 | biostudies-literature

Previous page
1 / 877
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 877
Next page

Sort by:

Relevance

Page size

8763 Results

Show results for

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

CHEBI ID

Metabolite Name

Study type

Release Date

Lab affiliation

OmicsDI is part of the ELIXIR infrastructure

Tweets