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UnknownRegulation of tert-Butyl Hydroperoxide Resistance by Chromosomal OhrR in A. baumannii ATCC 19606.
Not available
S-EPMC8002998 | biostudies-literature
TranscriptomicsSerotonergic regulation of melanocyte conversion: a bioelectric network explains stochastic all-or-none hyperpigmentation
Depolarization of resting membrane potential in select cells in Xenopus larvae induces striking hyperpigmentation due to dysregulation of melanocytes. Here, we show that this non-cell-autonomous process is mediated by cAMP, CREB, and the transcription factors Sox10 and Slug. Our microarray analysis ...
ORGANISM(S): Xenopus laevis 
2015-11-03 | E-GEOD-70834 | biostudies-arrayexpress
UnknownVinculin haploinsufficiency impairs integrin-mediated costamere remodeling on stiffer microenvironments.
Not available
S-EPMC11875886 | biostudies-literature
TranscriptomicsInduction of pluripotency in mouse somatic cells with novel factors (expression)
For years, reprogramming factors that induce pluripotency have been identified primarily from ESC-enriched factors, pluripotency-associated factors such as Oct4, Sox2, Klf4, c-Myc, Nanog, Esrrb, Sall4, Utf1, Lin28, PRDM14, and Tet2. Through genome-wide screen we identified novel regulators of reprog...
ORGANISM(S): Mus musculus 
2013-05-28 | E-GEOD-47441 | biostudies-arrayexpress
TranscriptomicsIdentification of WRKY22 direct targets under submergence in Arabidopsis with ChIP
To identify direct targets of WRKY22, we created a transgenic Arabidopsis line that expresses a c-myc epitope-tagged WRKY22 and used ChIP followed by microarray hybridization (ChIP-chip) to screen for candidates and validate the in vivo protein-DNA interactions with ChIP followed by quantitative PCR...
ORGANISM(S): Arabidopsis thaliana 
2013-07-03 | E-GEOD-40138 | biostudies-arrayexpress
TranscriptomicsRegulation of initiation of chromosome replication by oriC-proximal DnaA-box clusters in Bacillus subtilis
Comparison of transcriptions in wild_type, delta-6 (deletion of six DnaA-box clusters (DBCs)), delta-5 and delta-DBC[yydA-yycS] strains, to see effect of the DBCs on transcription of neighboring genes and DnaA-regulated genes.
ORGANISM(S): Bacillus subtilis 
2011-07-01 | E-MEXP-3069 | biostudies-arrayexpress
TranscriptomicsInduction of pluripotency in mouse somatic cells with lineage specifiers (RNA-seq)
For years, reprogramming factors that induce pluripotency have been identified primarily from ESC-enriched factors, pluripotency-associated factors such as Oct4, Sox2, Klf4, c-Myc, Nanog, Esrrb, Sall4, Utf1, Lin28, PRDM14, and Tet2. Through genome-wide screen we identified novel regulators of reprog...
ORGANISM(S): Mus musculus 
2013-05-28 | E-GEOD-47442 | biostudies-arrayexpress
TranscriptomicsChAP-chip by array of Bacillus subtilis to obtain genome-wide profiles of AbrB and Abh
Genome-wide binding profiles of AbrB and Abh was determined by use of ChAP (chromatin affinity purification)-chip method, modified method of ChIP-chip. Genetic modification was undertaken to abrB and abh genes to translationally fuse 2HC (coding sequence of twelve histidine and chitin binding domai...
ORGANISM(S): Bacillus subtilis 
2010-12-24 | E-MEXP-2774 | biostudies-arrayexpress
TranscriptomicsChip-chip from Hepatocellular carcinoma (HCC) specimens with H3K4me3
Epigenetic changes commonly occur in hepatocellular carcinoma (HCC) and are associated with aberrant gene expression. Recently, we demonstrated the pivotal role of abnormal H3K4me3 methylation, which is catalyzed by the menin/MLL, a TrxG family, in HCC development. Meanwhile, there is clear evidence...
ORGANISM(S): Homo sapiens 
2013-11-08 | E-GEOD-52190 | biostudies-arrayexpress
TranscriptomicsChip-chip from Hepatocellular carcinoma (HCC) specimens with H3K27me3
Epigenetic changes commonly occur in hepatocellular carcinoma (HCC) and are associated with aberrant gene expression. Recently, we demonstrated the pivotal role of abnormal H3K4me3 methylation, which is catalyzed by the menin/MLL, a TrxG family, in HCC development. Meanwhile, there is clear evidence...
ORGANISM(S): Homo sapiens 
2013-11-13 | E-GEOD-52301 | biostudies-arrayexpress
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