Si W W - OmicsDI

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Unknown (4971)
Transcriptomics (723)
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Genomics (46)
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Homo sapiens (309)
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Arabidopsis thaliana (41)
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Meleagris gallopavo (3)
Phaeodactylum tricornutum (3)
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Organisms

Mus musculus x Rattus norvegicus (1)

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Disease

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Inoculated with P. syringae pv. tomato strain DC3000 + avrRps4 (1)
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Abnormal homeostasis (1)
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Paranoid schizophrenia (1)

Technology Type

Mass Spectrometry (180)
Shotgun proteomics (82)
HDMSE (49)
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Mass spectrometry (29)
MSE (16)
Data-independent acquisition (11)
SWATH MS (8)
Gel-based experiment (8)
Data-dependent acquisition (8)
Affinity purification coupled with mass spectrometry proteomics (7)
Top-down proteomics (6)
Chemical cross-linking coupled with mass spectrometry proteomics (5)
Mass spectrometry assay (4)
All-ion fragmentation (3)
NMR spectroscopy (1)
Proteogenomics (1)
DiaPASEF (1)
SRM/MRM (1)

Instrument Platform

NextSeq 500 (21)
Illumina NovaSeq 6000 (20)
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Illumina HiSeq 2000 (9)
Illumina HiSeq 4000 (9)
NextSeq 2000 (4)
Illumina HiSeq 1500 (3)
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G2565AA DNA microarray scanner [Agilent] (1)
BAS-5000 [FUJIFILM] (1)
418 [Affymetrix] (1)
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Publication Date

2010 (96)
2012 (89)
2014 (75)
2011 (75)
2013 (72)
2015 (70)
2016 (59)
2008 (56)
2025 (53)
2022 (46)
2023 (44)
2009 (41)
2021 (35)
2024 (31)
2026 (30)
2019 (30)
2020 (28)
2007 (20)
2018 (16)
2005 (15)
2017 (11)
2006 (7)
2004 (6)
2003 (1)

CHEBI ID

CHEBI:15428 (11)
CHEBI:16335 (9)
CHEBI:16704 (9)
CHEBI:30769 (9)
CHEBI:17562 (8)
CHEBI:16750 (8)
CHEBI:15741 (8)
CHEBI:17154 (8)
CHEBI:17750 (8)
CHEBI:16449 (8)
CHEBI:15354 (8)
CHEBI:17895 (8)
CHEBI:30805 (7)
CHEBI:17858 (7)
CHEBI:16708 (7)
CHEBI:17015 (7)
CHEBI:15940 (7)
CHEBI:17509 (7)
CHEBI:16027 (7)
CHEBI:30915 (7)
CHEBI:27897 (7)
CHEBI:17295 (7)
CHEBI:18066 (6)
CHEBI:17822 (6)
CHEBI:15611 (6)
CHEBI:49033 (6)
CHEBI:25094 (6)
CHEBI:18237 (6)
CHEBI:16040 (6)
CHEBI:16436 (6)

Metabolite Name

Glycine (7)
Uridine (6)
Valine (5)
Adenosine (5)
Cytidine (5)
Guanosine (5)
Anserine (4)
Betaine (4)
Choline (4)
Lysine (4)
Tyrosine (4)
Serine (4)
Alanine (4)
Riboflavin (4)
Linoleic acid (4)
Glutamine (4)
Adenine (4)
Cystathionine (3)
Leucine (3)
Cyclohexylamine (3)
Trigonelline (3)
Thymine (3)
N1-Acetylspermidine (3)
7-Methylguanine (3)
Carnitine (3)
Benzoic acid (3)
Taurine (3)
Guanine (3)
Cytosine (3)
Sarcosine (3)

First Public Date

2026 (1)
2025 (1)
2024 (1)

Modification

Not available (2)

Study type

Transcription profiling by array (498)
RNA-seq of coding RNA (83)
ChIP-seq (35)
RNA-seq of coding RNA from single cells (21)
RNA-seq of non coding RNA (18)
ChIP-chip by tiling array (16)
Comparative genomic hybridization by array (16)
Unknown experiment type (15)
Methylation profiling by array (9)
Other (7)
Transcription profiling by tiling array (5)
RNA-seq of total RNA (5)
RNAi profiling by array (4)
ChIP-chip by array (4)
DNA-seq (4)
Methylation profiling by high throughput sequencing (4)
MicroRNA profiling by array (3)
Transcription profiling by SAGE (2)
Cell line - One-color microarray (2)
High-throughput sequencing (2)
Genotyping by high throughput sequencing (2)
MNase-seq (1)
RNA-seq of non coding RNA from single cells (1)
Differential (1)
MicroRNA profiling by high-throughput sequencing (1)
Human - One-color microarray (1)
Animal - High-throughput sequencing (1)
MBD-seq (1)
Transcription profiling by RT-PCR (1)
Spatial transcriptomics by high-throughput sequencing (1)

Release Date

2025 (693)
2022 (666)
2023 (627)
2024 (579)
2021 (573)
2020 (421)
2019 (304)
2018 (268)
2015 (231)
2017 (208)
2016 (207)
2014 (165)
2013 (138)
2010 (130)
2012 (127)
2011 (107)
2026 (98)
2008 (67)
2009 (56)
2007 (23)
2005 (18)
2006 (15)
2004 (7)
2003 (3)
2002 (2)
1997 (2)
2000 (1)
1999 (1)
1998 (1)

Lab affiliation

Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego, Campos dos Goytacazes, RJ, Brazil. Unidade de Biologia Integrativa, Setor de Genômica e Proteômica, UENF, Campos dos Goytacazes, RJ, Brazil. (3)
Department of Pharmaceutical Biosciences, Uppsala University (3)
PI in de Department of Molecular Biology in Centro de Biología Molecular ‘“Severo Ochoa’” (CBMSO)- Universidad Autónoma de Madrid (UAM), leading the project "Role of mitochondrial bioenergetics in skeletal muscle secretrome during exercise and pathology". (2)
Lab of Proteome Research, Department of Molecular Biology and Genetics, Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia (2)
Research Centre for Genetic Engineering and Biotechnology “Georgi D Efremov”, Macedonian Academy of Sciences and Arts, Skopje, Krste Misirkov 2, 1000 Skopje, Republic of North Macedonia (2)
Center for Synthetic Microbiology (SYNMIKRO) & Faculty of Chemistry, Philipps-University Marburg, 35043 Marburg, Germany (2)
Center for Biotechnology and Department of Botany, Federal University of Rio Grande do Sul, Porto Alegre, P.O. Box 15005, 91501-970, Brazil (2)
Molecular Physiology, Leiden Institute for Chemistry, Leiden University, The Netherlands (2)
ProteoToul, Institute of Pharmacology and Structural Biology (IPBS), CNRS, Toulouse (2)
State Key Laboratory of Medical Molecular Biology, Department of Biochemistry and Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing 100005, China (2)
State Key Laboratory of Medical Molecular Biology, Department of Biochemistry and Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing 100005, China. (2)
Laboratory of Pharmaceutical Biotechnology/ProGenTomics, Ghent University, Ottergemsesteenweg 460, 9000 Ghent, Belgium (2)
University of Washington (2)
Department of Biomedical Engineering, College of Life Science and Technology, Huazhong University of Science and Technology, N0. 1037 Luoyudong Road, Hongshan District, Wuhan 430074 (2)
Department of Chemistry, University of Marburg, 35043 Marburg, Germany Center for Synthetic Microbiology (SYNMIKRO), 35043 Marburg, Germany Max Planck Fellow Group Molecular Physiology of Microbes, Max Planck Institute for Terrestrial Microbiology, 35043 Marburg, Germany (1)
Comparative Perinatal Development - Department of Veterinary Sciences - Faculty of Pharmaceutical, Biomedical and Veterinary Sciences - University of Antwerp (1)
Cambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Cambridge, CB2 1QR UK (1)
Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego, Campos dos Goytacazes, RJ, Brazil. Unidade de Biologia Integrativa, Setor de Genômica e Proteômica, UENF, Campos dos Goytacazes, RJ, Brazil (1)
Departamento de Ciencias Agrarias Y del Medio Natural, Universitat Jaume I, Campus Riu Sec, 12071 Castello de la Plana, Spain (1)
Unicamillus, International Medical University of Rome, Departmental Faculty of Medicine and Surgery (1)
Department of Nephrology, Guangdong Provincial People’s Hospital, Guangdong Academy of Medical Sciences, Guangzhou, China;Guangdong-Hong Kong Joint Laboratory on Immunological and Genetic Kidney Diseases; Guangzhou, China. (1)
1. Departamento de Biología Molecular, Centro de Biología Molecular ‘“Severo Ochoa’” (CBMSO), c/ Nicolás Cabrera 1, Universidad Autónoma de Madrid, Madrid, Spain. 2. Centro de Investigación Biomédica en red de Enfermedades Raras (CIBERER), ISCIII, Madrid, Spain. 3. Instituto de Investigación Hospital 12 de Octubre, i+12, Universidad Autónoma de Madrid, Madrid, Spain. (1)
University Marburg, Center for Synthetic Microbiology (SYNMIKRO) & Department of Chemistry, Karl-von-Frisch Strasse 14, 35043 Marburg, Germany (1)
Department of Biophysics, Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Šlechtitelů 27, 783 71 Olomouc, Czech Republic (1)
Utrecht University, Biomolecular Mass Spectrometry and Proteomics (1)
Institute of Medical Sciences, University of Aberdeen, Foresterhill, Aberdeen, AB25 2ZD, United Kingdom (1)
5Department of Biotechnology, Graduate School of Engineering, Osaka University (1)
Department of Applied Chemistry, Kyung Hee University, Yongin-si, Gyeonggi-do 446-701, South Korea (1)
University of Fortaleza (1)
Laboratory of Neuroproteomics - Unicamp (1)

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Inhibition of Oligomeric BAX by an Anti-Apoptotic Dimer

BAX is a pro-apoptotic BCL-2 protein that resides in the cytosol as a monomer until triggered by cellular stress to transform into an oligomer that permeabilizes the mitochondria and induces apoptosis. We previously reported the generation of a full-length BAX oligomer (BAXO) that recapitulates pro-...

ORGANISM(S): Homo sapiens (Human)

2025-11-21 | PXD049315 | Pride

Silicon metabolism in diatoms

We investigated the effects of extracellular silicic acid on the whole Phaeodactylum triconutum transcriptome. In this work, global transcription analyses were combined with comparative studies of other elements, and detailed analyses of the silicon transporters. Our results provide insight on Si-se...

ORGANISM(S): Phaeodactylum tricornutum

2009-09-29 | E-GEOD-12015 | biostudies-arrayexpress

Homometallic Intervalence Charge Transfer Band of Co(II/III) Induced by Phase Transitions in a Heterometallic Co-W Charge Transfer Photomagnet.

Not available

S-EPMC12825454 | biostudies-literature

Precursor-based surface modification of cathodes using Ta and W for sulfide-based all-solid-state batteries.

Not available

S-EPMC7324361 | biostudies-literature

Synthetic redesign of Escherichia coli W for faster metabolism of sugarcane molasses.

Not available

S-EPMC11382391 | biostudies-literature

Earth's geodynamic evolution constrained by ¹⁸²W in Archean seawater.

Not available

S-EPMC9110358 | biostudies-literature

Investigation on converting 1-butene and ethylene into propene via metathesis reaction over W-based catalysts.

Not available

S-EPMC9078573 | biostudies-literature

Transcription profiling of Arabidopsis to investigate protective role of silicon in the Arabidopsis-powdery mildew pathosystem

The role and essentiality of silicon (Si) in plant biology has been debated for over 150 years in spite of numerous reports describing its beneficial properties. To obtain unique insights regarding the effect of Si on plants, we performed a complete transcriptome analysis of both control and powdery...

ORGANISM(S): Arabidopsis thaliana

2008-06-14 | E-GEOD-5718 | biostudies-arrayexpress

Complete Genome Sequence of Staphylococcus aureus CI/BAC/25/13/W, Isolated from Contaminated Platelet Concentrates in England.

Not available

S-EPMC8582310 | biostudies-literature

Complete Genome Sequence of Staphylococcus aureus PS/BAC/169/17/W, Isolated from a Contaminated Platelet Concentrate in England.

Not available

S-EPMC8582312 | biostudies-literature

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