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This is the first genome-scale model of G. dulcis, an extremely desiccation-tolerant cyanobacterium isolated from the Atacama desert by Azua-Bustos et al. (2014). We sequenced, closed, and annotated the G. dulcis genome, and created the model using KBase, and COBRApy. We included cyanobacterium-base...
2024-12-18 | MODEL2303050001 | BioModels
Pseudomonas putida mt-2 metabolizes m-xylene and other aromatic compounds through the enzymes encoded by the xyl operons of the TOL plasmid pWW0 along with other chromosomally-encoded activities. Tiling arrays of densely overlapping oligonucleotides were designed to cover every gene involved in this...
ORGANISM(S): Pseudomonas putida 
Elevated plasma homocysteine is an independent risk factor for cardiovascular disease and stroke, however the etiology remains poorly understood. Elevated homocysteine is known to inhibit methyltransferases including DNA methyltransferases, but no methylome-wide analysis of elevated homocysteine has...
ORGANISM(S): Homo sapiens 
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