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ProteomicsDifferent SWI/SNF complexes coordinately promote R-loop- and RAD52- dependent transcription-coupled homologous recombination
The SWI/SNF family of ATP-dependent chromatin remodeling complexes are implicated in multiple DNA damage response mechanisms and frequently mutated in cancer. The BAF and PBAF complexes are two major types of SWI/SNF complexes that are functionally distinguished by their exclusive subunits. Accumula...
ORGANISM(S): Homo sapiens (Human) 
2023-07-31 | PXD035140 | Pride
Swi/snf  transcription-coupled homologous recombination  r-loops  rad52  dna damage response  arid1a  arid1b  brg1  brm 
UnknownDDX47, MeCP2, and other functionally heterogeneous factors protect cells from harmful R loops.
Not available
S-EPMC10066596 | biostudies-literature
UnknownHuman mitochondrial degradosome prevents harmful mitochondrial R loops and mitochondrial genome instability.
Not available
S-EPMC6205488 | biostudies-literature
TranscriptomicsEffect of shade and nitrogen content on Arabidopsis Col-0 and cytokinin mutants abcg14 and cypDM
This project aimed to understand the interplay between light signalling, transzeatin signalling and nitrogen availability on hypocotyl elongation responses. To do so, mRNAseq on shoots was performed, with the following variables studied in all possible combinations: Genotypes: Wild-Type (Col-0), ...
ORGANISM(S): Arabidopsis thaliana 
2024-09-19 | E-MTAB-13638 | biostudies-arrayexpress
UnknownmetagenomeFeatures: an R package for working with 16S rRNA reference databases and marker-gene survey feature data.
Not available
S-EPMC6761971 | biostudies-literature
ProteomicsGlycan Markers of Human Stem Cells Assigned with Beam Search Arrays
Glycan antigens recognized by monoclonal antibodies have served as stem cell markers. To understand regulation of their biosynthesis and their roles in stem cell behavior precise assignments are required. We have applied state-of-the-art glycan array technologies to compare the glycans bound by five...
ORGANISM(S): Cellular Organisms 
2019-06-18 | PXD013972 | JPOST Repository
UnknownFANCM limits ALT activity by restricting telomeric replication stress induced by deregulated BLM and R-loops.
Not available
S-EPMC6538666 | biostudies-literature
UnknownLCZ4r package R for local climate zones and urban heat islands.
Not available
S-EPMC11882999 | biostudies-literature
UnknownSILVA in 2026: a global core biodata resource for rRNA within the DSMZ digital diversity.
Not available
S-EPMC12807666 | biostudies-literature
UnknownIntention-to-treat outcomes utilising a stringent event definition in children and young people treated with tisagenlecleucel for r/r ALL through a national access scheme.
Not available
S-EPMC11018620 | biostudies-literature
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