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TranscriptomicsExpression profiling of MCF10A cells in 2D and 3D culture
In these microarray experiments, we characterize the gene expression of mammary epithelial cells (MCF10A cells) grown in either a traditional monolayer cell culture setting (2D) or on Matrigel, which induces single MCF10A cells to form organized acinar structures (3D). Morphogenesis of mammary epith...
ORGANISM(S): Homo sapiens 
2011-06-01 | E-GEOD-26148 | biostudies-arrayexpress
UnknownIron-related markers are associated with infection after liver transplantation.
Not available
S-EPMC5696081 | biostudies-literature
TranscriptomicsMicroarray results from atrial tissue isolated from 6-week swimming exercised mice compared to sedentary controls
Atrial mRNA was harvested after 6 weeks of swimming exercise. Microarrays (Affymetrix MoGene1.0ST) were run and normalized using RMA.
ORGANISM(S): Mus musculus 
2014-11-19 | E-MTAB-3106 | biostudies-arrayexpress
TranscriptomicsRNA-seq of mouse astrocytes in monoculture and co-cultured with rat neurons (both inactive and active).
Neurons induce a dramatic transformation in developing astrocytes, causing them to develop a complex stellate morphology resembling their appearance in vivo. However, the transcriptional changes that accompany this transformation are not known, nor are the signalling mechanisms responsible. Similarl...
ORGANISM(S): Rattus norvegicus 
2017-05-02 | E-MTAB-5514 | biostudies-arrayexpress
ProteomicsTissue- and plasma-derived exosomal protein biomarkers define multiple human cancers
There is an unmet clinical need for improved tissue and liquid biopsy tools for cancer detection. We investigated the proteomic profile of exosomes in 426 human samples from tissue explants (TE), plasma and other bodily fluids. Among traditional exosome markers, CD9, HSPA8, ALIX, HSP90AB1 represent ...
ORGANISM(S): Mus musculus (Mouse) Homo sapiens (Human) 
2020-08-17 | PXD018301 | Pride
Exosomes  extracellular vesicles  proteomics  cancer  liquid biopsy  biomarkers  mass spectrometry  early cancer detection 
UnknownBirth cohorts in asthma and allergic diseases: report of a NIAID/NHLBI/MeDALL joint workshop.
Not available
S-EPMC4088262 | biostudies-literature
TranscriptomicsA gene signature in histologically normal surgical margins is predictive of oral carcinoma recurrence
Samples were prospectively collected from patients with histologically normal surgical resection margins. 96 tissue samples (histologically normal margins, oral carcinoma and adjacent normal tissues) from 24 patients comprised the training set. Our study design was guided by the hypothesis that the ...
ORGANISM(S): Homo sapiens 
2011-08-02 | E-GEOD-31056 | biostudies-arrayexpress
TranscriptomicsGenomic profiling of lymphomas in Canis lupus familiaris
Comparative oncology is a developing research discipline that is being used to assist our understanding of human neoplastic diseases. Companion canines are a preferred animal oncology model due to spontaneous tumor development and similarity to human disease at the pathophysiological level. We use ...
ORGANISM(S): Canis lupus familiaris 
2012-12-15 | E-GEOD-41917 | biostudies-arrayexpress
UnknownExploring the genetics of airflow limitation in lung function across the lifespan - a polygenic risk score study.
Not available
S-EPMC11577569 | biostudies-literature
GenomicsICGC breast cancer sequencing project SNP6 data
Affymetrix SNP6.0 breast cancer genome sequencing data
EGAD00010000915 | EGA
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