Skeletal muscle regeneration

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Organisms

Mus musculus (343)
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Duchenne muscular dystrophy (4)
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Metabolite Name

Myricetin-3-O-hexosyl(1-2)deoxyhexoside (1)
(2S,3S,4S,5R,6S)-6-[2-(3,4-dihydroxyphenyl)-5-hydroxy-4-oxochromen-7-yl]oxy-3,4,5-trihydroxyoxane-2-carboxylic acid (1)
CARMINIC_ACID (1)
(2-aminoethoxy)[2-[icosa-5.8.11.14-tetraenoyloxy]-3-[octadec-1-en-1-yloxy]propoxy]phosphinic acid (1)
3-[4,5-dihydroxy-6-(hydroxymethyl)-3-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-5,7-dihydroxy-2-(4-hydroxyphenyl)chromen-4-one (1)
4-HYDROXYCYCLOHEXANECARBOXYLIC ACID (1)
3-(Methylsulfinyl)propylglucosinolate (1)
Methyl-4-hydroxy-3-methoxybenzoate (1)
2-keto_valeric_acid (1)
3,19,23-Trihydroxyurs-12-en-28-oic acid (1)
Myristoleate (1)
2-Docosahexaenoyl-1-stearoyl-sn-glycero-3-phosphoethanolamine (1)
Sclareol (1)
2-Methylphenol (1)
8-Oxononanoic acid (1)
5-Carboxyfluorescein (1)
.alpha.,.alpha.,.alpha.-Trifluorothymidine (1)
2-amino-3-({hydroxy[2-[icosa-5.8.11-trienoyloxy]-3-(octadecanoyloxy)propoxy]phosphoryl}oxy)propanoic acid (1)
[2-[docosa-4.7.10.13.16.19-hexaenoyloxy]-3-(octadecanoyloxy)propoxy]({[2.3.4.5.6-pentahydroxycyclohexyl]oxy})phosphinic acid (1)
1,2-Dilinolenoyl-sn-glycero-3-phosphoethanolamine (1)
1,3-Dihydroxyacetone dimer (1)
Cystine-glutathione (1)
Benzamide, 2-chloro-5-nitro-N-phenyl- (1)
2,4-dinitrotoluene (1)
(2-{[2-[hexadec-9-enoyloxy]-3-(tetradecanoyloxy)propyl phosphonato]oxy}ethyl)trimethylazanium (1)
Dihydroquercetin (1)
Denticetic-acid (1)
2',3'-Cyclic AMP (1)
1,2-dihydroxyheptadec-16-en-4-yl acetate (1)
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IsPrivate

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2016 (5)
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Modelling Approach

Ordinary differential equation model (6)

Study type

Transcription profiling by array (119)
RNA-seq of coding RNA (15)
ChIP-seq (8)
Unknown experiment type (5)
Transcription profiling by RT-PCR (4)
RNA-seq of non coding RNA (3)
RNA-seq of coding RNA from single cells (2)
Transcription profiling by SAGE (1)
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Animal - Single-cell sequencing (1)
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Release Date

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1998 (1)

Lab affiliation

Department of Physiology and Pharmacology, Karolinska Institutet, Stockholm, Sweden (1)
Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, United States (1)
Novo Nordisk Center for Basic Metabolic Research, University of Copenhagen, Denmark. (1)
McPhail Equine Performance Center, Department of Large Animal Clinical Sciences, Michigan State University (1)
Institute of Biochemistry and Molecular Biology I, University Clinics and Faculty of Medicine, Heinrich-Heine University Düsseldorf, Germany (1)
Laboratory of Regenerative and Movement Biology, Dept. of Health Sciences and Technology ETH Zurich, Schorenstrasse 16, 8603 Schwerzenbach, Switzerland (1)
Nanjing University School of Life Sciences (1)
Division of Genetics and Genomics, Boston Children's Hospital, Boston, MA 02115, USA Department of Genetics and Pediatrics, Harvard Medical School, Boston, MA 02115, USA (1)
Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Université de Strasbourg, CNRS UMR 7104, Inserm UMR-S 1258, Illkirch, France. (1)
Université Paris Cité, CNRS, Epigenetics and Cell Fate, UMR7216, F-75013 Paris, France (1)
Miniaturisation pour la Synthèse, l'Analyse & la Protéomique (MSAP), CNRS, USR 3290, Université de Lille (1)
Musculoskeletal Development and Regeneration Group, Institute of Chemistry and Biochemistry, Freie Universität Berlin, Berlin, Germany (1)
State Key Laboratory of Pharmaceutical Biotechnology, Model Animal Research Center of Medical School and Gulou Hospital affiliated Medical School, Nanjing University (1)
Instituto de Invesstigaciones Sanitarias de Santiago de Compostela (1)
Physiology, NUI Galway (1)
Systems Biology Ireland, School of Medicine Conway Institute; Belfield; Dublin 4; Ireland. (1)
Proteomics Core Facilities Biogenouest IRSET Inserm U1085 France (1)
University of Minnesota - Rehabilitation Science (1)
FLI Jena, Germany (1)
University of Sherbrooke (1)
Leibniz Institute on Aging – Fritz Lipmann Institute (FLI) Beutenbergstr. 11 07745 Jena Germany Tel.: +49-3641-656831 (1)
Leibniz Institute on Aging, Fritz Lipmann Institute, Beutenbergstrasse 11, 07745 Jena, Germany (1)
Sorbonne Université, Inserm, Institut de Myologie, Centre de Recherche en Myologie, Paris, France. (1)
Clinical Proteomics Group, University of Oxford, United Kingdom (1)
1Rosalind & Morris Goodman Cancer Institute, McGill University, Montreal, QC, H3A 1A3, Canada 2Department of Biochemistry, McGill University, Montreal, QC, H3G 1Y6, Canada (1)
-Translational Cardiomyology Laboratory, Stem Cell and Developmental Biology, Department of Development and Regeneration, KU Leuven, Leuven, Belgium -Histology and Medical Embryology Unit, Department of Anatomy, Histology, Forensic Medicine and Orthopaedics, Sapienza University of Rome, Rome, Italy (1)
Leibniz Institute on Aging - Fritz Lipmann Institute Jena (1)
Leibniz Institut on Aging - Fritz Lipmann Institut e.V. (FLI) (1)
Department of Biology, Rome University of Rome Tor Vergata, Rome, IT. (1)
Department of Chemical Science of University of Naples federico II (1)

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Differential microRNA Expression during Muscle Regeneration

MicroRNAs (miRNAs) are important in the regulation of many biological processes including muscle development. However, little is known regarding miRNA regulation of muscle regeneration. In mature murine tibialis anterior muscle following injury, 298 miRNAs were significantly changed during the time ...

ORGANISM(S): Mus musculus

2012-04-24 | E-GEOD-37479 | biostudies-arrayexpress

Photosynthetic bioenergetic-redox restoration rejuvenates the aged muscle regenerative niche

Aging impairs muscle regeneration, but the key constraint remains unclear. Aged injured muscle fails to restore mitochondrial respiration, membrane potential, ATP/NADPH balance and redox control, forming a bioenergetic-redox bottleneck. To target this, we engineered CM-NTU-Ce, a C2C12 membrane-co...

2026-08-13 | MTBLS15312 | MetaboLights

Transcription profiling of mouse muscle regeneration to define transcriptional regulatory pathways involved in muscle regeneration

Temporal expression profiling was utilized to define transcriptional regulatory pathways in vivo in a mouse muscle regeneration model. Potential downstream targets of MyoD were identified by temporal expression, promoter data base mining, and gel shift assays; Slug and calpain 6 were identified as n...

ORGANISM(S): Mus musculus

2007-11-06 | E-GEOD-469 | biostudies-arrayexpress

Restoring Systemic GDF11 Levels Reverses Age-Related Dysfunction in Mouse Skeletal Muscle

In this study, we investigated signaling pathways in Skeletal muscle precursors that are altered with aging and age-related deficits in muscle regenerative potential. We performed fluorescence activated cell sorting (FACS) to obtain highly purified skeletal muscle satellite cells from young, middle-...

ORGANISM(S): Mus musculus

2014-05-08 | E-GEOD-50821 | biostudies-arrayexpress

Dysregulated gene expression in Mef2a knockout mice subjected to cardiotoxin-induced muscle injury

We identified genes expressed in mouse skeletal muscle, during the process of muscle regeneration after injury, which are dysregulated in the absence of Mef2a expression. MEF2A is a member of the evolutionarily conserved MEF2 transcription factor family which has known roles in cardiac muscle develo...

ORGANISM(S): Mus musculus

2013-02-12 | E-GEOD-41871 | biostudies-arrayexpress

Expression data from skeletal muscle satellite cells at different development stages

Satellite cells are responsible for the long-term regenerative capacity of adult skeletal muscle. The diminished muscle performance and regenerative capacity of aged muscle is thought to reflect progressive fibrosis and atrophy. Whether this reduction in muscle competency also involves a diminishmen...

ORGANISM(S): Mus musculus

2014-05-26 | E-GEOD-47401 | biostudies-arrayexpress

Profiling of mouse muscle stem cells aging and activation upon skeletal muscle injury

Utilizing glycerol intramuscular injections in M. musculus provide a models of skeletal muscle damage followed by skeletal muscle regeneration. In particular, glycerol-induced muscle injury triggers accute activation of skeletal muscle stem cells, called satellite cells. However, aging dramatically ...

ORGANISM(S): Mus musculus

2016-07-04 | E-GEOD-81096 | biostudies-arrayexpress

Exercise promotes growth and vascularization of fast skeletal muscle by activating myogenic and angiogenic transcriptional programs in adult zebrafish

The adult skeletal muscle is a plastic tissue with a remarkable ability to adapt to different levels of activity by altering its excitability, its contractile and metabolic phenotype and its mass. Knowledge on the mechanisms responsible for muscle mass comes primarily from models of muscle inactivit...

ORGANISM(S): Danio rerio

2014-12-23 | E-GEOD-58929 | biostudies-arrayexpress

Transcriptional Alterations in Skeletal Muscle Following Desmin Deletion

Desmin is a cytoskeletal protein in muscle involved in integrating cellular space and transmitting forces. In this study we sought to determine the effects of desmin deletion on skeletal muscle at the transcriptional level across many pathways of muscle physiology. RNA was isolated from the TA musc...

ORGANISM(S): Mus musculus

2012-07-10 | E-GEOD-34388 | biostudies-arrayexpress

Modelling Skeletal Muscle Ageing and Repair In Vitro

Healthy skeletal muscle can regenerate after ischaemic, mechanical, or toxin-induced injury, but ageing impairs that regeneration potential. This has been largely attributed to dysfunctional satellite cells and reduced myogenic capacity. Understanding which signalling pathways are associated with re...

ORGANISM(S): Homo sapiens

2023-07-05 | E-MTAB-12248 | biostudies-arrayexpress

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