Smith Hunter H - OmicsDI

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Unknown (528)
Genomics (22)
Transcriptomics (6)
Metabolomics (5)
Proteomics (3)
Models (2)

Organisms

Homo sapiens (24)
Ovis aries (2)
Gallus gallus (2)
Metazoa (1)
Rattus (1)
Human alphaherpesvirus 1 (1)
Mus musculus (1)

Repository

EGA (22)
biostudies-arrayexpress (6)
MetaboLights (5)
BioModels (2)
pride (2)
MassIVE (1)

Tissue

Cell culture (2)
Keratinocyte (1)

Disease

T. circumcincta infection (1)
Infected (1)
IBDV infected (1)
Normal (1)
Acute leukemia (1)

Technology Type

Mass spectrometry (5)
Mass Spectrometry (2)
Shotgun proteomics (2)
Illumina HiSeq 2000 (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (4)
Liquid Chromatography MS - negative - reverse phase (3)
Illumina HiSeq 2000 (1)
Q Exactive (1)
6540 Q-TOF LC/MS (Agilent) (1)
Gas Chromatography MS - positive (1)
LTQ Orbitrap Velos (Thermo Scientific) (1)

Publication Date

2005 (2)
2011 (2)
2023 (2)
2015 (1)
2014 (1)
2013 (1)
2012 (1)
2019 (1)
2025 (1)
2022 (1)
2021 (1)
2016 (1)
2020 (1)

CHEBI ID

CHEBI:18257 (2)
CHEBI:131497 (1)
CHEBI:132726 (1)
CHEBI:133216 (1)
CHEBI:133218 (1)
CHEBI:133224 (1)
CHEBI:133236 (1)
CHEBI:133244 (1)
CHEBI:133245 (1)
CHEBI:133429 (1)
CHEBI:133461 (1)
CHEBI:133468 (1)
CHEBI:133472 (1)
CHEBI:133473 (1)
CHEBI:133475 (1)
CHEBI:133477 (1)
CHEBI:133478 (1)
CHEBI:133480 (1)
CHEBI:133482 (1)
CHEBI:133516 (1)
CHEBI:133521 (1)
CHEBI:133527 (1)
CHEBI:133561 (1)
CHEBI:133564 (1)
CHEBI:133566 (1)
CHEBI:136347 (1)
CHEBI:140898 (1)
CHEBI:140940 (1)
CHEBI:140943 (1)
CHEBI:140947 (1)

Metabolite Name

(-)-Epicatechin (1)
(9Z,11E,15Z)-(13S)-hydroperoxyoctadeca-9,11,15-trienoate (1)
12-OPDA (1)
17-hydroxylinolenic acid (1)
2',4,4',6'-tetrahydroxychalcone (1)
2(R)-HOT (1)
2(R)-HPOT (1)
2-Oxoglutaric acid (1)
22alpha-hydroxy-campest-4-en-3-one (1)
26-hydroxybrassinolide (1)
26-hydroxycastasterone (1)
4-Methylphenol (1)
4-coumarate (1)
6-deoxocastasterone (1)
6-deoxotyphasterol (1)
6alpha-hydroxy-castasterone (1)
7-Isomethyljasmonate (1)
CDP-4-dehydro-3,6-dideoxy-D-glucose (1)
CDP-4-dehydro-6-deoxy-D-glucose (1)
Dodecyl sulfate (1)
FA 12:0 (1)
FA 14:0 (1)
FA 16:0 (1)
FA 18:0 (1)
FA 18:1 (1)
FA 18:2 (1)
FA 21:0 (1)
GDP-D-glucose (1)
GDP-L-fucose (1)
HMDB0000034 (1)

IsPrivate

False (2)

Modelling Approach

Ordinary differential equation model (2)

Study type

Transcription profiling by array (5)
RNA-seq of coding RNA (1)

Release Date

2022 (63)
2021 (49)
2020 (49)
2023 (44)
2025 (38)
2024 (36)
2015 (33)
2017 (27)
2013 (26)
2019 (26)
2018 (26)
2016 (26)
2012 (22)
2014 (19)
2011 (13)
2010 (12)
2009 (8)
2008 (7)
2026 (6)
2007 (1)
2006 (1)
2003 (1)
2001 (1)

Lab affiliation

1School of Biomedical Sciences and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, NSW, 2308, Australia 2 Precision Medicine Research Program, Hunter Medical Research Institute, New Lambton Heights, NSW, 2305, Australia (1)
Cambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge, CB2 0XY, UK (1)

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H-Bond Templated Oligomer Synthesis Using a Covalent Primer.

Not available

S-EPMC9501907 | biostudies-literature

Niederer2006_CardiacMyocyteRelaxation

This a model from the article: A quantitative analysis of cardiac myocyte relaxation: a simulation study. Niederer SA, Hunter PJ, Smith NP. Biophys J. 2006:90(5):1697-722. 16339881 , Abstract: The determi...

2005-01-01 | MODEL8687196544 | BioModels

Isotopic evidence of high reliance on plant food among Later Stone Age hunter-gatherers at Taforalt, Morocco.

Not available

S-EPMC11090808 | biostudies-literature

Assessing the Potency of the Novel Tocolytics 2-APB, Glycyl-H-1152, and HC-067047 in Pregnant Human Myometrium.

Not available

S-EPMC9810572 | biostudies-literature

The precursor for nerve growth factor (proNGF) is not a serum or biopsy-rinse biomarker for thyroid cancer diagnosis.

Not available

S-EPMC6882079 | biostudies-literature

Cooperativity in the assembly of H-bonded duplexes of synthetic recognition-encoded melamine oligomers.

Not available

S-EPMC11886990 | biostudies-literature

Terkildsen2008_CardiomyocyteFunction

This a model from the article: Using Physiome standards to couple cellular functions for rat cardiac excitation-contraction. Terkildsen JR, Niederer S, Crampin EJ, Hunter P, Smith NP. Exp Physiol. (2008) 93(7) pp 919-29; Pubmed ID: 18344258 ...

2005-01-01 | MODEL7893871775 | BioModels

Solvation-Enhanced Salt Bridges.

Not available

S-EPMC11487562 | biostudies-literature

Study protocol of a pilot randomised controlled trial assessing the feasibility and acceptability of RecoverEsupport: a digital health intervention to enhance recovery in women undergoing surgery for breast cancer.

Not available

S-EPMC11808865 | biostudies-literature

Effectiveness and cost-effectiveness of a digital health intervention to support patients with colorectal cancer prepare for and recover from surgery: study protocol of the RecoverEsupport randomised controlled trial.

Not available

S-EPMC9990701 | biostudies-literature