Smith J Andrew C JA

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Unknown (43)
Genomics (19)
Metabolomics (3)

Organisms

Homo sapiens (19)

Repository

EGA (19)
MetaboLights (3)

Technology Type

Illumina 15K (8)
Mass spectrometry (3)
Illumina HiSeq 2000 (1)

Instrument Platform

5975C Series GC/MSD (Agilent) (1)
Flow injection analysis MS - negative (1)
Flow injection analysis MS - positive (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - alternating - hilic (1)

Publication Date

2023 (1)
2019 (1)
2018 (1)

CHEBI ID

CHEBI:15741 (3)
CHEBI:16865 (3)
CHEBI:30769 (3)
CHEBI:30915 (3)
CHEBI:14314 (2)
CHEBI:15354 (2)
CHEBI:15355 (2)
CHEBI:15414 (2)
CHEBI:15422 (2)
CHEBI:15611 (2)
CHEBI:15756 (2)
CHEBI:15891 (2)
CHEBI:15919 (2)
CHEBI:15963 (2)
CHEBI:16027 (2)
CHEBI:16199 (2)
CHEBI:16235 (2)
CHEBI:16335 (2)
CHEBI:16668 (2)
CHEBI:16680 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16742 (2)
CHEBI:16750 (2)
CHEBI:16908 (2)
CHEBI:16919 (2)
CHEBI:17126 (2)
CHEBI:17151 (2)
CHEBI:17154 (2)
CHEBI:17239 (2)

Metabolite Name

(4R)-4-Hydroxy-L-glutamic acid (1)
(R)-3-Hydroxybutyric acid (1)
(S)-3-Hydroxybutyric acid (1)
1,3-Diaminopropane (1)
1-Methyl-L-histidine (1)
1-Methylhistamine (1)
1-Methylnicotinamide (1)
11.29 393 257 217 (1)
11.29 397 425 471 (1)
11.77 287 285 (1)
12.62 539 449 359 217 (1)
16.20 456 297 355 (1)
16.26 456 297 355 (1)
2,3-Dihydroxypropanoic acid (1)
2,3-Dihydroxypropyl hexopyranoside (1)
2,3-Diphospho-D-glyceric acid (1)
2,3-Pyridinedicarboxylic acid (1)
2,5-Dihydroxybenzaldehyde (1)
2,5-Dihydroxybenzoic acid (1)
2-(Hydroxymethyl)butanoic acid (1)
2-Amino-3-methoxybenzoic acid (1)
2-Aminoadipic acid (1)
2-Deoxy-5-cytidylic acid (1)
2-Deoxy-D-ribonic acid (1)
2-Deoxy-D-ribose (1)
2-Deoxyadenosine (1)
2-Deoxyadenosine 5-triphosphate (1)
2-Deoxycytidine (1)
2-Deoxycytidine 5-diphosphate (1)
2-Deoxyguanosine (1)

Release Date

2021 (9)
2024 (5)
2022 (4)
2020 (4)
2019 (3)
2017 (3)
2012 (3)
2025 (2)
2023 (2)
2016 (2)
2026 (1)
2018 (1)
2015 (1)
2011 (1)
2010 (1)
2009 (1)

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Protein-metabolite interactomics of carbohydrate metabolism reveal regulation of lactate dehydrogenase

Metabolic networks are interconnected and influence diverse cellular processes. The protein-metabolite interactions that mediate these networks are frequently low affinity and challenging to systematically discover. We developed mass spectrometry integrated with equilibrium dialysis for the disco...

2023-08-07 | MTBLS7237 | MetaboLights

Adjuvant Lapatinib and Trastuzumab for Early Human Epidermal Growth Factor Receptor 2-Positive Breast Cancer: Results From the Randomized Phase III Adjuvant Lapatinib and/or Trastuzumab Treatment Optimization Trial.

Not available

S-EPMC4872016 | biostudies-literature

The Kalanchoe genome provides insights into convergent evolution and building blocks of crassulacean acid metabolism

Crassulacean acid metabolism (CAM) is a water-use efficient adaptation of photosynthesis that has evolved independently many times in diverse lineages of flowering plants. We hypothesize that convergent evolution of protein sequence and temporal gene expression underpins the independent emergences o...

2018-01-09 | MTBLS519 | MetaboLights

Risk factors for suicidality in Huntington disease: An analysis of the 2CARE clinical trial.

Not available

S-EPMC6448454 | biostudies-literature

Succinate accumulation drives ischaemia-reperfusion injury during organ transplantation

During heart transplantation, storage in cold preservation solution is thought to protect the organ by slowing metabolism; by providing osmotic support; and by minimising ischaemia-reperfusion (IR) injury upon transplantation into the recipient. Despite its widespread use, our understanding of the m...

2019-09-20 | MTBLS1085 | MetaboLights

PCGP Ph-like ALL

Background: BCR-ABL1-like, or Ph-like acute lymphoblastic leukemia is characterized by a gene expression profile similar to BCR-ABL1 positive ALL, genetic alterations of lymphoid transcription factor genes, and poor outcome. Sequencing of small numbers of Ph-like ALL cases has identified genetic alt...

EGAS00001000654 | EGA

Immune-mediated genetic pathways resulting in pulmonary function impairment increase lung cancer susceptibility.

Not available

S-EPMC6946810 | biostudies-literature

PCGP Ph-likeALL RNASeq - samples

DATA FILES FOR SJPhLike-RNASeq

EGAD00001001016 | EGA

PCGP Ph-likeALL SNP6 - samples

PCGP Ph-likeALL SNP6

EGAD00010000598 | EGA

PCGP Ph-likeALL WES - samples

DATA FILES FOR Ph-likeALL WES