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TranscriptomicsArray results for differential gene expression in 661W, a mouse cone photoreceptor-derived cell line, comparing cells incubated with vehicle controls vs. those treated with either of two 7-dehdyrocholesterol-derived oxysterols or cholesterol
RELEVANCE: Smith-Lemli-Opitz syndrome (SLOS) is a human disease caused by mutations in the gene coding for the enzyme DHCR7 (7-dehydrocholesterol (7DHC) reductase), which catalyzes the final step of cholesterol biosynthesis. Accumulated 7DHC in tissues and body fluids of SLOS patients gives rise t...
ORGANISM(S): Mus musculus 
2021-03-20 | E-MTAB-10055 | biostudies-arrayexpress
TranscriptomicscaArray_EXP-578: Gene Expression Profiles of Pediatric B-Precursor High-Risk Acute Lymphoblastic Leukemia (COG Study AALL0232 - Cohort 1).
This experiment comprises 283 CEL files generated on the Affymetrix U133 Plus 2.0 gene expression microarray platform, using patient peripheral blood and bone marrow samples from the first cohort of patients accrued to Children's Oncology Group Study AALL0232. No clinical covariate data is provided ...
ORGANISM(S): Homo sapiens 
2015-05-13 | E-GEOD-68790 | biostudies-arrayexpress
Proteomics,MultiomicsHs_NSCLC_Phospho
This is a large-scale survey of tyrosine kinase activity in lung cancer. Tyrosine kinase signaling across 41 non-small cell lung cancer (NSCLC) cell lines and over 150 NSCLC tumors are characterized Using a phosphoproteomic approach.
ORGANISM(S): Homo Sapiens (human) 
2007-12-31 | PAe005321 | PeptideAtlas
ProteomicsAn Orphan-Moonlighting Gene PRL-1 Enhances Photosynthetic Efficiency and Productivity in Plants
Increasing photosynthetic efficiency remains a major goal across the globe given its central role in CO2 assimilation. Here, we identified a nuclear genome-residing orphan gene, comprised of 3 exons, two with apparent endophytic origins and the third being a highly conserved fragment of the RIBULOSE...
ORGANISM(S): Populus Trichocarpa (ncbitaxon:3694) 
2023-04-24 | MSV000091785 | MassIVE
TranscriptomicsCUT&RUN LoV-U of beta-catenin, TCF/LEF transcription factors and histone modifications in HEK293T and mouse embryonic hindlimb tissue at 11.5 days post coitum
In our attempts to profile different regulators of the WNT/b-catenin transcriptional complex, CUT&RUN failed to produce consistent binding patterns of the non-DNA-binding b-catenin. We developed a modified CUT&RUN protocol, which we refer to as LoV-U (Low Volume and Urea), that enables the generatio...
ORGANISM(S): Mus musculus 
2022-07-16 | E-MTAB-11951 | biostudies-arrayexpress
ProteomicsZ.mays - Leaf, Zone1, SC (Facette,plantcell,2013)
abundance based on Spectral counting, zone1, Interaction consistency score: 7.2, Coverage: 29
ORGANISM(S): 4577 
2013-00-00 | 3261977917 | PAXDB
ProteomicsZ.mays - Leaf, Zone2, SC (Facette,plantcell,2013)
abundance based on Spectral counting, zone2, Interaction consistency score: 9.0, Coverage: 31
ORGANISM(S): 4577 
2013-00-00 | 352122239 | PAXDB
ProteomicsZ.mays - Leaf, Mature, SC (Facette,plantcell,2013)
abundance based on Spectral counting, mature, Interaction consistency score: 8.2, Coverage: 19
ORGANISM(S): 4577 
2013-00-00 | 1441245021 | PAXDB
ProteomicsZ.mays - Leaf, Zone3, SC (Facette,plantcell,2013)
abundance based on Spectral counting, zone3, Interaction consistency score: 8.9, Coverage: 31
ORGANISM(S): 4577 
2013-00-00 | 1572849780 | PAXDB
TranscriptomicsNBFGC cDNA microarray initial test
Initial test of the NBFGC cDNA microarray. Keywords = bovine, cDNA, microarray, false positive
ORGANISM(S): Bos taurus 
2010-06-05 | E-GEOD-436 | biostudies-arrayexpress
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