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ProteomicsEvaluation of sodium deoxycholate as solubilization buffer
Sodium deoxycholate was evaluated as alternative protein solubilization buffer to a more commonly used urea/thiourea buffer. Sodium deoxycholate was found to have similar efficiency as of urea/thiourea buffer in solubilizing proteins from oil palm fruit mesocarps.
ORGANISM(S): Elaeis guineensis var. tenera (Oil palm) 
2019-08-16 | PXD013255 | Pride
Sodium deoxycholate Oil palm Proteomics 
ProteomicsPeptide recovery from acid-precipitated sodium deoxycholate pellet
Sodium deoxycholate (SDC) is MS-compatible ionic detergent which is compatible with in-solution tryptic digestion. SDC is removed from tryptic digested mixtures easily by acid precipitation and it has been demonstrated its capacity to increase trypsin activity. Additionally, and on the contrary to u...
ORGANISM(S): Homo sapiens (Human) 
2016-02-04 | PXD002811 | Pride
Human plasma / mass spectrometry / shotgun proteomics / sodium deoxycholate / trypsin digestion. 
TranscriptomicsCulture of Campylobacter jejuni with Sodium Deoxycholate induces Virulence Gene Expression
C. jejuni, a spiral-shaped gram-negative bacterium, is a leading bacterial cause of human foodborne illness. Acute disease is associated with C. jejuni invasion of the intestinal epithelium. Further, maximal host cell invasion requires the secretion of proteins termed Campylobacter invasion antige...
ORGANISM(S): Campylobacter jejuni 
2010-05-26 | E-GEOD-10110 | biostudies-arrayexpress
ProteomicsEnhanced Quantitative LC-MS/MS Analysis of N-linked Glycans Derived from Glycoproteins Using Sodium Deoxycholate Detergent
Protein glycosylation is a common protein post-translational modification (PTM) in living organisms and has been shown to associate with multiple diseases, and thus may potentially be a biomarker of such diseases. Efficient protein/glycoprotein extraction is a key step in the preparation of N-glycan...
ORGANISM(S): Homo sapiens (Human) 
2018-05-16 | PXD008687 | Pride
Acidic labile detergent Detergent removal Lc-ms/ms sample preparation N-glycomics Sodium deoxycholate 
GenomicsCandida tropicalis biofilm formation under secondary bile salt sodium deoxycholate
Candida tropicalis biofilm formation under secondary bile salt sodium deoxycholate
PRJNA1395136 | ENA
TranscriptomicsThe transcriptional profile of deoxycholate-induced sporulation in Clostridium perfringens food poisoning isolate
Clostridium perfringens type A is a common source of food poisoning in humans. Vegetative cells sporulate in the small intestinal tract and produce a major pathogenic factor, C. perfringens enterotoxin (CPE) during sporulation. Although sporulation plays a critical role in the pathogenesis of food p...
ORGANISM(S): Clostridium perfringens 
2016-03-13 | E-GEOD-69649 | biostudies-arrayexpress
ProteomicsEnrichment of Cysteine S-palmitoylated peptides using Sodium Deoxycholate Acid Precipitation - SDC-ACE
S-palmitoylation is a poorly understood post-translational modification that is gaining more attention as an essential regulator of cellular processes. The reversible nature of S-palmitoylation allows for fine-tuned control of cellular events and adaptation to stimuli. The enrichment of S-palmitoyla...
ORGANISM(S): Mus musculus (Mouse) Acyrthosiphon pisum (Pea aphid) 
2026-02-16 | PXD054682 | Pride
Cysteine palmitoylation  mouse brain palmitoylome  dbdb mice  mouse tissue specific palmitoylation 
UnknownEvaluation of sodium deoxycholate as solubilization buffer for oil palm proteomics analysis.
Not available
S-EPMC6695131 | biostudies-literature
UnknownSynthesis and Plasmonic Chiroptical Studies of Sodium Deoxycholate Modified Silver Nanoparticles.
Not available
S-EPMC6117651 | biostudies-literature
UnknownThe Campylobacter jejuni response regulator, CbrR, modulates sodium deoxycholate resistance and chicken colonization.
Not available
S-EPMC1112060 | biostudies-literature
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