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MetabolomicsGlycoalkaloid composition explains variation in slug resistance in Solanum dulcamara
In natural environments, plants have to deal with a wide range of different herbivores whose communities vary in time and space. It is believed that the chemical diversity within plant species has mainly arisen from selection pressures exerted by herbivores. So far, the effects of chemical diversity...
2019-06-17 | MTBLS738 | MetaboLights
TranscriptomicsMetabolic and transcriptomic responses of leaves from European potato reference cultivars with differential tolerance to long-term drought
Systems responses of mature leaves from 4 reference cultivars of a larger collection of European potato cultivars (Solanum tuberosum L.) are investigated by metabolome profiling and RNA-Sequencing. The chosen reference cultivars, Milva, Alegria, Desiree, and Saturna, vary in ascending order in regar...
ORGANISM(S): Solanum tuberosum 
2016-07-06 | E-GEOD-77826 | biostudies-arrayexpress
TranscriptomicsCharacterization and detection of novel and conserved miRNAs in Potato
small RNA profile of Solanum tuberosum group Andigena small RNA profile of Solanum tuberosum group Andigena
ORGANISM(S): Solanum tuberosum 
2013-04-01 | E-GEOD-39230 | biostudies-arrayexpress
TranscriptomicsSolanum tuberosum Transcriptome or Gene expression
Solanum tuberosum tuber response to Phytophthora infestans
ORGANISM(S): Solanum tuberosum 
2013-06-01 | E-MTAB-4301 | biostudies-arrayexpress
TranscriptomicsTranscriptional changes during photoperiodic tuber induction in Solanum tuberosum ssp andigena
For expression profiling analyses of early stages of tuber induction, plants of Solanum tuberosum ssp andigena (7540) were used. This wild subspecies is strictly dependent on photoperiod for tuberisation, such that short days (SD) inductive conditions are required in order to trigger tuber induction...
ORGANISM(S): Solanum tuberosum subsp. andigenum 
2011-10-05 | E-GEOD-31336 | biostudies-arrayexpress
TranscriptomicsIdentification and characterization of miRNAome in root, stem, leaf and tuber developmental stages of potato (Solanum tuberosum L.) by high-throughput sequencing
Purpose: MicroRNAs (miRNAs) are ubiquitous components of endogenous plant transcriptome. miRNAs are small, single-stranded and ~21 nt long RNAs which regulate gene expression at the post-transcriptional level and are known to play essential roles in various aspects of plant development and growth. P...
ORGANISM(S): Solanum tuberosum 
2014-01-09 | E-GEOD-52599 | biostudies-arrayexpress
TranscriptomicsRNAseq of gall-enriched tissue of Solanum tuberosum infected by Globodera pallida
We compared the gene expression of Solanum tuberosum genotype SH infected with either Globodera pallida D383, E400 or mock infected. After we (mock)-infected the plants we collected gall-enriched tissue 3 and 6 days post infection. The transcriptomes were measured using RNA-seq. The aim of the exper...
ORGANISM(S): Solanum tuberosum 
2022-04-30 | E-MTAB-11646 | biostudies-arrayexpress
TranscriptomicsTranscriptomics of shade avoidance and drought in Solanum tuberosum.
The intent was to study, from transcriptome analysis, shade and drought responses in Solanum tuberosum (potato). We performed Illumina 50 bp single-end RNA-seq in tissues of control and treated var. Spunta wild-type plants. Drought experiments also included two independent AtBBX21-overexpressing (BB...
ORGANISM(S): Solanum tuberosum 
2023-07-12 | E-MTAB-12771 | biostudies-arrayexpress
TranscriptomicsGene expression study after 3 days of cold or salt exposure in a Solanum tuberosum cultivar called Desirée
This SuperSeries is composed of the following subset Series: GSE34110: Gene expression study after 3 days of cold exposure in a Solanum tuberosum cultivar called Desirée GSE34116: Gene expression study after 3 days of salt exposure in a Solanum tuberosum cultivar called Desirée Refer to individual S...
ORGANISM(S): Solanum tuberosum 
2011-12-03 | E-GEOD-34118 | biostudies-arrayexpress
TranscriptomicsJHI St WM daylength
Recent advances have defined some of the components of photoperiodic signalling that lead to tuberisation in potato including orthologues of FLOWERING LOCUS T (StSP6A) and CYCLING DOF FACTOR (StCDF1). The aim of the current study is to investigate the molecular basis of permissive tuber initiation u...
ORGANISM(S): Solanum tuberosum 
2013-11-01 | E-MTAB-1799 | biostudies-arrayexpress
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