Sort   by:  
 Page size 
TranscriptomicsMarker gene discovery for Staphylococcus epidermidis infection in zebrafish embryos (Agilent)
We use the zebrafish embryo model to study the innate immune response against Staphylococcus epidermidis. Therefore, we injected S. epidermidis (and three controls groups) into the yolk at 2 hpf and samples at mutiple timepoints. Gene expression profiles were obtained at 6, 30, 54, 78, 102 and 126 h...
ORGANISM(S): Danio rerio 
2013-04-01 | E-GEOD-37227 | biostudies-arrayexpress
TranscriptomicsTraf6 function in the innate immune response of zebrafish embryos
Transcriptional profiling of the zebrafish embryonic host response to a systemic bacterial infection with Salmonella typhimurium (strain SL1027); comparison between traf6 knock-down and control morpholino treated embryos. All infection experiments were performed using mixed egg clutches of ABxTL str...
ORGANISM(S): Danio rerio 
2010-08-01 | E-GEOD-21024 | biostudies-arrayexpress
TranscriptomicsTraf6 function in the innate immune response of zebrafish embryos
Transcriptional profiling of the zebrafish embryonic host response to a systemic bacterial infection with Salmonella typhimurium (strain SL1027); comparison between traf6 knock-down and control morpholino treated embryos. Two-way factorial dual colour design with factor 1 'infection with Salmonella ...
ORGANISM(S): Danio rerio 
2010-08-01 | E-GEOD-20310 | biostudies-arrayexpress
TranscriptomicsBiological variation between zebrafish development series
Transcriptome analysis during embryogenesis usually requires pooling of embryos to obtain sufficient RNA. Hence, the measured levels of gene-expression represent the average mRNA levels of pooled samples and the biological variation among individuals is lost for inclusion into statistical models use...
ORGANISM(S): Danio rerio 
2010-04-01 | E-GEOD-17736 | biostudies-arrayexpress
TranscriptomicsTechnical variation between RNA isolations from individual embryos
Transcriptome analysis during embryogenesis usually requires pooling of embryos to obtain sufficient RNA. Hence, the measured levels of gene-expression represent the average mRNA levels of pooled samples and the biological variation among individuals is lost for inclusion into statistical models use...
ORGANISM(S): Danio rerio 
2010-04-01 | E-GEOD-17738 | biostudies-arrayexpress
UnknownCommon and specific downstream signaling targets controlled by Tlr2 and Tlr5 innate immune signaling in zebrafish.
Not available
S-EPMC4514945 | biostudies-literature
UnknownMicroRNA-146 function in the innate immune transcriptome response of zebrafish embryos to Salmonella typhimurium infection.
Not available
S-EPMC3852110 | biostudies-literature
TranscriptomicsTranscription profiling of two 24 hour old zebrafish embryos from the Tuebingen line
Transcriptome analyses of 24-hour zebrafish embryos from the Tuebingen line were performed using the Affymetrix GeneChip Zebrafish Genome Array (GeneChip 430)
ORGANISM(S): Danio rerio 
2006-06-12 | E-MEXP-737 | biostudies-arrayexpress
TranscriptomicsGene expression profiling of adult zebrafish caudal fin and tumor tissues
Using Agilent custom made expression microarrays we analyzed the difference of gene expression in caudal fin tissues of wild type fish and transgenic fish that can form melanomas. For this we used a transgenic line with forced expression of V600EBRAF that resulted in melanocyte hyperplasia, while ...
ORGANISM(S): Danio rerio 
2016-01-13 | E-GEOD-76791 | biostudies-arrayexpress
TranscriptomicsPathogen recognition and activation of the innate immune response in zebrafish
We use the zebrafish embryo model to study the similarities and differences in the innate immune response against three different bacterial pathogens. Therefore, we injected E. tarda, Salmonella, or M. marinum into the caudal vein of 28 hours post fertilization (hpf) zebrafish embryos and analysed t...
ORGANISM(S): Danio rerio 
2012-11-01 | E-GEOD-35474 | biostudies-arrayexpress
Sort   by:  
 Page size