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MetabolomicsMetabolomics analysis of Streptomyces sp. 30177 in response to Sphingomonas sp. 06703 supernatant
This study investigated the metabolomic response of Streptomyces sp. 30177 to cell-free supernatant of Sphingomonas sp. 06703. Untargeted LC-MS metabolomics was performed to identify differentially regulated metabolites.
2026-07-30 | MTBLS15203 | MetaboLights
MetabolomicsMetabolomics analysis of Streptomyces sp. 30177 in response to Sphingomonas sp. 06703 supernatant
This study investigated the metabolomic response of Streptomyces sp. 30177 to cell-free supernatant of Sphingomonas sp. 06703. Untargeted LC-MS metabolomics was performed to identify differentially regulated metabolites and pathways involved in metabolic regulation and stress response.
2026-07-23 | MTBLS14907 | MetaboLights
MetabolomicsUntargeted metabolomics analysis of volatile organic compounds emitted by Streptomyces sp. 30177 treated with sterile-filtered supernatant of Sphingomonas sp. 06703
This study aimed to analyze the volatile organic compounds (VOCs) produced by Streptomyces sp. 30177 in response to treatment with the cell-free filtrate of Sphingomonas sp. 06703.
2026-07-30 | MTBLS15206 | MetaboLights
TranscriptomicsGenome-wide transcriptional changes of Sphingomonas wittichii RW1 during inoculation and growth in contaminated sand [experiment 1]
The efficacy of inoculation of single pure bacterial cultures into complex microbiomes, for example, in order to achieve increased pollutant degradation rates in contaminated material (i.e., bioaugmentation), has been frustrated by insufficient knowledge on the behaviour of the inoculated bacteria u...
ORGANISM(S): Sphingomonas wittichii RW1 
2014-06-23 | E-GEOD-54814 | biostudies-arrayexpress
TranscriptomicsGenome-wide transcriptional changes of Sphingomonas wittichii RW1 during inoculation and growth in contaminated sand [experment 2]
The efficacy of inoculation of single pure bacterial cultures into complex microbiomes, for example, in order to achieve increased pollutant degradation rates in contaminated material (i.e., bioaugmentation), has been frustrated by insufficient knowledge on the behaviour of the inoculated bacteria u...
ORGANISM(S): Sphingomonas wittichii RW1 
2014-06-23 | E-GEOD-54815 | biostudies-arrayexpress
MetabolomicsAnalysis of Volatile Organic Compounds (VOCs) in Streptomyces sp. 30177 treated with cell-free filtrate of Sphingomonas sp. 06703 using Headspace Solid-Phase Microextraction (HS-SPME) coupled with Gas Chromatography-Mass Spectrometry (GC-MS)
This study aimed to analyze the volatile organic compounds (VOCs) produced by Streptomyces sp. 30177 in response to treatment with the cell-free filtrate of Sphingomonas sp. 06703. The cell-free filtrate was prepared by culturing Sphingomonas sp. 06703 in liquid medium, followed by centrifugation an...
2026-07-23 | MTBLS14913 | MetaboLights
TranscriptomicsGenome-wide transcriptional changes of Sphingomonas wittichii RW1 during inoculation and growth in contaminated sand
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Sphingomonas wittichii RW1 
2014-06-23 | E-GEOD-54816 | biostudies-arrayexpress
ProteomicsSphingomonas wittichii RW1 shotgun proteomics
Chlorinated congeners of dibenzo-p-dioxin and dibenzofuran are widely dispersed pollutants that can be treated using microorganisms, such as the Sphingomonas wittichii RW1 bacterium, able to transform some of them into non-toxic substances. The enzymes of the upper pathway for dibenzo-p-dioxin degra...
ORGANISM(S): Sphingomonas wittichii 
2013-10-22 | PXD000403 | Pride
Sphingomonas wittichii rw1 dioxin dibenzofuran 
TranscriptomicsGenome-wide gene expression to dibenzofuran in Sphingomonas wittichii RW1
Sphingomonas wittichii RW1 is a bacterium isolated for its ability to degrade the toxic polyaromatic hydrocarbon dibenzofuran (dbf) and its polychlorinated derivatives. Its genome consists of a chromosome and two plasmids, encoding for more than 5300 genes. We studied genome-wide expression of strai...
ORGANISM(S): Sphingomonas wittichii RW1 
2012-04-17 | E-GEOD-37328 | biostudies-arrayexpress
TranscriptomicsExpression analysis of motile strain of Sphingomonas sp. A1
Investigation of whole genome gene expression level in motile strain of Sphingomonas. sp A1 All flagellar genes in motile strain of Sphingomonas. sp A1 are highly transcribed. A two chip study using total RNA recovered from wild-type and motile strains of Sphingomonas. sp A1 grown in 0.5% alginate m...
ORGANISM(S): Sphingomonas sp. A1 
2014-11-01 | E-GEOD-62901 | biostudies-arrayexpress
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