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TranscriptomicsTime-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply
The experiment aim is the identification of the transcriptional response of mature nodules of Medicago truncatula inoculated with the strain MD4 of Sinorhizobium medicae in response to different nitrogen (N) supply (N-satiety and N-deficient conditions). We performed a time-course (1 and 3 days trea...
ORGANISM(S): Medicago truncatula 
2020-09-30 | E-MTAB-8597 | biostudies-arrayexpress
TranscriptomicsTime-course transcriptome analysis of Sinorhizobium medicae (MD4 strain) in mature nodules of Medicago truncatula grown in split-root under different nitrogen (N) supply
The experiment aim is the identification of the transcriptional response of mature nodules of Medicago truncatula inoculated with the strain MD4 of Sinorhizobium medicae in response to different nitrogen (N) supply (N-satiety and N-deficient conditions). We performed a time-course (1 and 3 days trea...
ORGANISM(S): Sinorhizobium medicae 
2020-09-30 | E-MTAB-8598 | biostudies-arrayexpress
TranscriptomicsTime-course transcriptome analysis in roots of N-limited Medicago truncatula plants grown in split-root inoculated with Sinorhizobium medicae
The experiment aims to analyze the effect of inoculation with Sinorhizobium medicae MD4 of on the transcriptome of the Medicago truncatula roots of N-limited plants. We divided the roots systems into two parts; one of them was supplied with nutrient solution with mineral N (0.5 mM for N-limited plan...
ORGANISM(S): Medicago truncatula 
2021-04-30 | E-MTAB-9932 | biostudies-arrayexpress
TranscriptomicsGene expression induced by localized nitrate in a split-root system
Arable soils are extremely heterogeneous in spatial nutrient distribution. It is well documented that lateral roots (LRs) proliferate in nitrate-rich patch. Yet less information is available as to which genes are involved in this process, in particular in cereals. To understand the molecular mechani...
ORGANISM(S): Zea mays 
2008-12-30 | E-GEOD-11145 | biostudies-arrayexpress
TranscriptomicsEffect of contrasted N regimes on the root transcriptome of Medicago truncatula plants cultivated in split root systems and inoculated for 2, 4 and 7 days with Sinorhizobium medicae
The experiment aims to analyze the effect of systemic signaling of plant N demand on the transcriptome of Medicago truncatula roots inoculated with Sinorhizobium medicae MD4 at 2, 4, and 7 days post-inoculation (dpi). We divided the roots systems into two parts; one of them was supplied with nutrien...
ORGANISM(S): Medicago truncatula 
2021-04-30 | E-MTAB-9941 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Medicago roots of 6 biological types NO3S, NO3C, NH4S, NH4C, N2S and N2C to investigate Regulation of nitrogen acquisition (NO3-, NH4+ and N2) by nitrogen status
affy_nitrogen_medicago - affy_nitrogen_medicago - Experiment has been designed to characterize the molecular expression patterns associated to a contrasted modification of the nitrogen status of the whole plant. The systemic effects of nitrogen status modifications are investigated and compared on n...
ORGANISM(S): Medicago truncatula 
2008-06-17 | E-GEOD-9818 | biostudies-arrayexpress
TranscriptomicsA systemic view of coordinated root responses to NO3- heterogeneous environment in Arabidopsis
We investigated the morphological roots decisions of Arabidopsis in a NO3- heterogeneous medium. To do so, we used the Split-Root System which is an experimental set up to assess root decisions in nutrient heterogeneous medium. Split-root plants have been subjected to three different treatments. ‘Co...
ORGANISM(S): Arabidopsis thaliana 
2011-12-01 | E-GEOD-22966 | biostudies-arrayexpress
GenomicsTime-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply
Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply
PRJEB35811 | ENA
Genomics
Transcriptome data of split-root system
PRJNA1127864 | ENA
UnknownUnraveling the hydrodynamics of split root water uptake experiments using CT scanned root architectures and three dimensional flow simulations.
Not available
S-EPMC4448007 | biostudies-literature
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