Sr-like protein

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Transcriptomics (193)
Unknown (156)
Genomics (40)
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Organisms

Homo sapiens (79)
Mus musculus (59)
Rattus norvegicus (24)
Aerococcus urinae NBRC 15544 = CCUG 36881 (13)
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Bacteria (13)
Bartonella quintana JK 31 (13)
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Organisms

Homo sapiens (8)
Mus musculus (5)
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Danio rerio (1)

Repository

biostudies-arrayexpress (189)
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Disease

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Technology Type

Mass Spectrometry (13)
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ILLUMINA, NextSeq 500 (1)
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Instrument Platform

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NextSeq 500 (3)
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Illumina HiSeq 4000 (2)
Gas Chromatography MS - positive (2)
Thermal cycler; magnetic separation rack; Qubit Fluorometer; Agilent TapeStation 4200 (1)
Microcentrifuge; magnetic separation rack; Qubit Flu/spectrophotometer; Agilent TapeStation 4200 (1)
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Element AVITI (1)
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NextSeq 2000 (1)
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Q Exactive (1)

Publication Date

2014 (26)
2010 (26)
2025 (18)
2008 (18)
2015 (17)
2013 (17)
2012 (16)
2009 (16)
2011 (15)
2007 (12)
2019 (9)
2024 (8)
2026 (7)
2016 (7)
2005 (4)
2023 (4)
2020 (4)
2022 (3)
2021 (3)
2017 (3)
2006 (2)
2018 (1)

CHEBI ID

CHEBI:16566 (3)
CHEBI:16393 (3)
CHEBI:15354 (3)
CHEBI:15350 (2)
CHEBI:24462 (2)
CHEBI:1606 (2)
CHEBI:70958 (2)
CHEBI:48430 (2)
CHEBI:30865 (2)
CHEBI:16344 (2)
CHEBI:30754 (2)
CHEBI:16927 (2)
CHEBI:15887 (2)
CHEBI:17752 (2)
CHEBI:16974 (2)
CHEBI:17768 (2)
CHEBI:15728 (2)
CHEBI:16610 (2)
CHEBI:15999 (2)
CHEBI:17515 (2)
CHEBI:17148 (2)
CHEBI:16552 (2)
CHEBI:16113 (2)
CHEBI:17154 (2)
CHEBI:15927 (2)
CHEBI:15355 (2)
CHEBI:17724 (2)
CHEBI:16958 (2)
CHEBI:16010 (2)
CHEBI:16040 (2)

Metabolite Name

L-Cysteine (3)
L-Alanine (3)
L-Lysine (3)
L-Arginine (3)
Choline (3)
Adenosine (3)
N-Acetylputrescine (3)
Cytosine (3)
Uracil (3)
L-Serine (3)
Guanosine (3)
Creatine (3)
L-Valine (3)
L-Isoleucine (3)
L-Methionine (3)
L-Tyrosine (3)
L-Phenylalanine (3)
Inosine (3)
1-Naphthylamine (2)
Ala-Pro (2)
Tyr-Pro (2)
His-Pro (2)
19-Noretiocholanolone (2)
2'-O-methylcytidine (2)
FAD (2)
D-Galactose (2)
N-Acetyl-D-Glucosamine (2)
Normetanephrine (2)
Acetaminophen (2)
Betaine (2)

IsPrivate

False (2)

Model Flag

Non Kinetic (1)

First Public Date

2025 (7)
2024 (5)
2014 (5)
2020 (3)
2022 (2)
2026 (1)
2023 (1)
2018 (1)

Modelling Approach

Ordinary differential equation model (2)

Study type

Transcription profiling by array (130)
RNA-seq of coding RNA (26)
ChIP-seq (9)
Unknown experiment type (6)
Animal - One-color microarray (3)
Other (2)
RNA-seq of coding RNA from single cells (2)
RNA-seq of non coding RNA (2)
Animal - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
ChIP-chip by array (1)
CLIP-seq (1)
Transcription profiling by RT-PCR (1)
MicroRNA profiling by high throughput sequencing (1)
Bisulfite-seq (1)
RIP-seq (1)
Methylation profiling by array (1)

Release Date

2014 (33)
2010 (32)
2015 (24)
2013 (24)
2008 (23)
2011 (20)
2009 (20)
2019 (18)
2012 (18)
2022 (16)
2021 (16)
2023 (14)
2007 (14)
2025 (12)
2016 (10)
2018 (10)
2024 (9)
2020 (9)
2017 (9)
2026 (4)
2003 (3)
2006 (2)
2005 (2)
2002 (1)
2001 (1)
1999 (1)

Lab affiliation

Bioanalytical Mass Spectrometry Group, Max-Planck Institute for Multidisciplinary Sciencies, Goettingen, Germany; Institue for Clinical Chemistry, University Medical Center Goettingen, Goettingen, Germany (1)
CNRS, INSERM, Univ. Lille, CHU Lille, Institut Pasteur de Lille, Centre d’Infection et d’Immunité de Lille, 59000 Lille, France (1)
Department of Biochemistry, Emory University, Atlanta, GA, USA Department of Neurology, Emory University School of Medicine, Atlanta, GA, USA (1)
Department of Biomedicine, Aarhus University, Aarhus, Denmark STENO Diabetes Center Aarhus, Aarhus, Denmark (1)
Department of Cancer Immunology and Virology, Dana-Farber Cancer Institute, Boston, MA 02215, USA, Department of Medicine, Harvard Medical School, Boston, MA 02115, USA (1)
Department of Molecular and Cellular Hemostasis, Sanquin Research, Amsterdam, the Netherlands; 3Department of Biomolecular Mass Spectrometry and Proteomics, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, The Netherlands (1)
Department of parasitology, College of Medicine, National Cheng Gung University, Tainan, Taiwan (1)
Division of Drug Discovery and Safety, Leiden Academic Centre for Drug Research, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands (1)
Instructor Department of Biochemistry and Molecular Biology University of Arkansas for Medical Sciences (1)
Max Planck for Multidisciplinary Sciences Bioanalytical Mass Spectrometry Am Fassberg 11 37077 Gottingen (1)
Sant Pau Memory Unit, Department of Neurology, Hospital de la Santa Creu i Sant Pau, Biomedical Research Institute Sant Pau (IIB Sant Pau), Universitat Autònoma de Barcelona, Barcelona, Spain (1)
Stress- and Immunoproteomics group Department of Molecular and Applied Microbiology Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute Jena (1)
University of Insubria (1)

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A single SR-like protein, Npl3, promotes pre-mRNA splicing in budding yeast

Mammalian SR proteins are a family of reversibly phosphorylated RNA binding proteins primarily studied for their roles in alternative splicing. While budding yeast lack alternative splicing, they do have three SR-like proteins: Npl3, Gbp2, and Hrb1. However, these have been primarily studied for the...

ORGANISM(S): Saccharomyces cerevisiae

2008-12-30 | E-GEOD-11491 | biostudies-arrayexpress

A single SR-like protein, Npl3, promotes pre-mRNA splicing in budding yeast

ORGANISM(S): Saccharomyces cerevisiae

2008-12-31 | GSE11491 | GEO

The SR-like protein Npl3 transfers mRNP components from the transcription site onto the mRNA

PRJNA674049 | ENA

SR-like RNA-binding protein Slr1 affects Candida albicans filamentation and virulence.

Not available

S-EPMC3639594 | biostudies-literature

Unphosphorylated SR-like Protein Npl3 Stimulates RNA Polymerase II Elongation

The production of a functional mRNA is regulated at every step of transcription. An area not well-understood is the transition of RNA polymerase II from elongation to termination. The S. cerevisiae SR-like protein Npl3 functions to negatively regulate transcription termination by antagonizing the bi...

ORGANISM(S): Saccharomyces cerevisiae

2008-09-06 | GSE12677 | GEO

A single SR-like protein, Npl3, promotes pre-mRNA splicing in budding yeast.

Not available

S-EPMC2677966 | biostudies-literature

Jumonji domain containing protein 6 (Jmjd6) modulates splicing and specifically interacts with arginine-serine-rich (RS) domains of SR- and SR-like proteins.

Not available

S-EPMC4081092 | biostudies-literature

Saccharomyces cerevisiae

A single SR-like protein, Npl3, promotes pre-mRNA splicing in budding yeast

PRJNA106303 | ENA

Unphosphorylated SR-like protein Npl3 stimulates RNA polymerase II elongation.