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ProteomicsShotgun Proteomics of Tomato Fruits: Evaluation and Optimization of Sample Preparation Methods and Mass Spectrometric Parameters
Optimization of sample preparation protocols and mass spectrometric parameters is essential for adequate proteome coverage. Though several protocols are available for 2D electrophoresis-based proteome profiling, very few protocols exist for sample preparation for shotgun proteomics and optimization ...
ORGANISM(S): Solanum lycopersicum 
2016-06-30 | PXD003920 | Pride
Shotgun proteomics Proteome coverage Label free quantification Fractionation Sample preparation Spectral counting Tomato fruit 
ProteomicsTomato clade proteome - Green-fruited Solanum habrochaites lacks fruit-specific carotenogenesis due to metabolic and structural blocks
Members of the tomato clade exhibit wide diversity in fruit coloration, growth habit, leaf morphology and mating preferences. However, the mechanisms governing inter-species diversity in fruit coloration are largely unknown. Therefore, a proteomic approach combined with carotenoid profiling and caro...
ORGANISM(S): Solanum lycopersicum 
2017-10-09 | PXD003817 | Pride
Red/orange and green fruited species Fruit proteome Tomato clade Chlorophyll degradation Chromoplast formation 
ProteomicsTomato phototropin1 fruit proteome
Tomato phototropin1 mutant exhibits deep red color in the ripe fruits compared to the wild type. However, the mechanisms governing this intense fruit coloration in the mutant are largely unknown. Therefore, a proteomic approach combined with carotenoid profiling and carotenogenic gene expression was...
ORGANISM(S): Solanum lycopersicum 
2021-02-24 | PXD018150 | Pride
Mature green Breaker and red ripe stages of ripening Chlorophyll degradation Tomato fruit proteome Carotenoids 
ProteomicsTomato trifoliate mutant proteome
Tomato trifoliate 5 mutant exhibits high carotenoid and folate levels. However, the mechanisms governing high carotenoid and folate levels of the mutant are largely unknown. Therefore, a proteomic approach combined with metabolite profiling and gene expression was used to decipher the effect of muta...
ORGANISM(S): Solanum lycopersicum 
2022-08-12 | PXD027940 | Pride
Mature green Breaker and red ripe stages of ripening Carotenoids and folates. Tomato fruit proteome 
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