Srinivasan S S - OmicsDI

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Unknown (1917)
Proteomics (40)
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Homo sapiens (35)
Mus musculus (18)
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Repository

biostudies-arrayexpress (35)
pride (32)
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Disease

Skeletal muscle atrophy (2)
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Technology Type

Mass Spectrometry (32)
Shotgun proteomics (22)
Bottom-up proteomics (4)
Gel-based experiment (3)
Mass spectrometry (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
ILLUMINA, Illumina HiSeq 2500 (1)
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Instrument Platform

Q Exactive Plus (3)
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UNIPROT ID/AC

P42212 (1)

CHEBI ID

CHEBI:138368 (2)
CHEBI:15354 (2)
CHEBI:15428 (2)
CHEBI:15611 (2)
CHEBI:15676 (2)
CHEBI:15724 (2)
CHEBI:15891 (2)
CHEBI:15999 (2)
CHEBI:16010 (2)
CHEBI:16344 (2)
CHEBI:16411 (2)
CHEBI:16449 (2)
CHEBI:16530 (2)
CHEBI:16543 (2)
CHEBI:16610 (2)
CHEBI:16675 (2)
CHEBI:16708 (2)
CHEBI:16737 (2)
CHEBI:16742 (2)
CHEBI:16797 (2)
CHEBI:16811 (2)
CHEBI:16919 (2)
CHEBI:16958 (2)
CHEBI:169985 (2)
CHEBI:17084 (2)
CHEBI:17126 (2)
CHEBI:17234 (2)
CHEBI:17368 (2)
CHEBI:17418 (2)
CHEBI:17533 (2)

Metabolite Name

(R)-3-hydroxybutyrylcarnitine (1)
1,3-Diaminopropane (1)
1-Methylnicotinamide (1)
1-linoleoyl-GPA (18:2)* (1)
1-methyl-4-imidazoleacetate (1)
1-methylhistidine (1)
1-methylnicotinamide (1)
12,13-DiHOME (1)
16a-hydroxy DHEA 3-sulfate (1)
2'-O-methylcytidine (1)
2'-O-methyluridine (1)
2'-deoxyuridine (1)
2,3-dihydroxyisovalerate (1)
2,5-Furandicarboxylic acid (1)
2,6-dihydroxybenzoic acid (1)
2-Hydroxy-2-methylbutyric acid (1)
2-Hydroxy-3-methylvaleric acid (1)
2-Hydroxybutyric acid (1)
2-Hydroxyisobutyric acid (1)
2-Hydroxyisovaleric acid (1)
2-Hydroxyphenylacetic acid (1)
2-Methylhippuric acid (1)
2-Oxoisocaproic acid (1)
2-aminoadipate (1)
2-aminobutyrate (1)
2-aminoheptanoate (1)
2-aminooctanoate (1)
2-aminophenol sulfate (1)
2-hydroxy-3-methylvalerate (1)
2-hydroxyacetaminophen sulfate* (1)

IsPrivate

False (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

Transcription profiling by array (19)
ChIP-seq (6)
RNA-seq of coding RNA (6)
Methylation profiling by array (2)
Unknown experiment type (1)
ChIP-chip by array (1)

Release Date

2025 (216)
2023 (205)
2021 (205)
2024 (167)
2022 (159)
2020 (148)
2018 (115)
2019 (110)
2017 (103)
2012 (85)
2015 (79)
2013 (72)
2016 (67)
2014 (65)
2011 (33)
2026 (27)
2010 (26)
2008 (21)
2009 (17)
2007 (11)
2005 (8)
2004 (5)
2006 (3)
2003 (2)
2002 (1)
2001 (1)
1999 (1)

Lab affiliation

Department of Inflammation and Immunity, Gastroenterology and Hepatology. Cleveland Clinic, Cleveland Ohio (3)
Department of Inflammation and Immunity, Gastroenterology and Hepatology. Cleveland Clinic, Cleveland Ohio, USA (2)
1. School of Biological Sciences, National Institute of Science Education and Research, Bhubaneswar – 752050, India 2. Homi Bhabha National Institutes (HBNI), Training School Complex, Anushakti Nagar, Mumbai, India 400094 (1)
9McKusick-Nathans Institute of Genetic Medicine, 10Departments of Biological Chemistry, and 11Pathology, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA. (1)
Ashoka University, Rajiv Gandhi Education City Sonipat, Haryana, India – 131029 (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) School of Life Sciences Technical University Munich (TUM) Gregor-Mendel-Straße 4 85354 Freising GERMANY Bavarian Center for Biomolecular Mass Spectrometry Technische Universität München Gregor-Mendel-Straße 4 85354 Freising DEUTSCHLAND / GERMANY (1)
Cambridge Institute for Medical Research, Hills Road, Cambridge, CB2 0XY (1)
Department of Animal Science, Bharathidasan University, Tiruchirappalli, India (1)
Department of Animal Science, Bharathidasan University, Tiruchirappalli, Tamil Nadu, India. (1)
Department of Biological Sciences, Kent State University, Kent, OH, United States. (1)
Department of Dermatology, Stanford School of Medicine, Stanford University (1)
Departments of Pediatrics and Genetics, Stanford University, Stanford, CA, USA. (1)
Division of Digestive Diseases, Department of Medicine, Emory University School of Medicine, Atlanta, GA 30322, USA (1)
Fred Hutchinson Cancer Center, Seattle WA, USA (1)
Institue of Bioinformatics Discoverer Building, 7th Floor International Tech Park Whitefield, Bangalore - 560 066 Karnataka, India. (1)
James McGill Professor of Neurology and Neurosurgery and Anatomy and Cell Biology Montreal Neurological Institute-Hospital McGill, Montreal CANADA (1)
LV Prasad Eye Institute,MTC campus, Patia,Bhubaneswar, India (1)
Lab no.3011,Department of Biophysics, All India Institute of Medical Sciences, New Delhi (1)
Lerner Research Institute, Cleveland Clinic, Cleveland, OH 44195, USA (1)
Massachusetts Institute of Technology, Department of Biological Engineering, David H Koch Institute for Integrative Cancer Research (1)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore, Maryland 21205 USA (1)
Program in Epithelial Biology, Stanford University-School of Medicine, Stanford, CA 94305 USA (1)
Proteomics Program Blegdamsvej 3 2200 København N Bygning 6 Building: 06-2-36 (1)
Staff Scientist Biological Systems & Engineering Division Lawrence Berkeley National Laboratory Berkeley CA 94720 (1)
Staff Scientist VII Signal Transduction Lab-1, National Institute of Immunology, Aruna Asaf Ali Marg New Delhi-110067 (1)
Telethon Institute of Genetics and Medicine (TIGEM) Department of Translational Medicine, University of Naples "Federico II", Italy (1)
UCSF (1)
University of Victoria (1)
Wellcome Centre for Cell-Matrix Research, Division of Cell Matrix Biology and Regenerative Medicine, School of Biological Sciences, Faculty of Biology Medicine and Health, The University of Manchester, United Kingdom (1)

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Sox10 Binding Analysis in the Central and Peripheral Nervous System

ChIP-seq of Sox10 in spinal cord and sciatic nerve 2 independent Sox10 ChIP samples each for spinal cord (CNS) and sciatic nerve (PNS), with respective inputs

ORGANISM(S): Rattus norvegicus

2015-04-01 | E-GEOD-64703 | biostudies-arrayexpress

Landomycins P-W, cytotoxic angucyclines from Streptomyces cyanogenus S-136.

Not available

S-EPMC3070852 | biostudies-literature

Exploration and Characterization of Novel Glycoside Hydrolases from the Whole Genome of Lactobacillus ginsenosidimutans and Enriched Production of Minor Ginsenoside Rg3(S) by a Recombinant Enzymatic Process.

Not available

S-EPMC7072194 | biostudies-literature

Crystal structures of 6a,6b,7,11a-tetra-hydro-6H,9H-spiro-[chromeno[3',4':3,4]pyrrolo-[1,2-c]thia-zole-11,3'-indoline]-2',6-dione and 5'-methyl-6a,6b,7,11a-tetra-hydro-6H,9H-spiro-[chromeno[3',4':3,4]pyrrolo-[1,2-c]thia-zole-11,3'-indoline]-2',6-dione.

Not available

S-EPMC6362654 | biostudies-literature

Chromatin modification by SUMO-1 stimulates the promoters of translation machinery genes

We determined the occupancy of SUMO-1 on chromatin in HeLa cells by use of chromatin affinity purification coupled with next generation sequencing 18 samples examined in syncrhonized HeLa cells: Cells in G1, early S (S0)/mid (S3)/ late S phase (S6), and mitosis (M), triplicates for each sample. 1 Ch...

ORGANISM(S): Homo sapiens

2012-10-02 | E-GEOD-41264 | biostudies-arrayexpress

The metabolic cost of changing walking speeds is significant, implies lower optimal speeds for shorter distances, and increases daily energy estimates.

Not available

S-EPMC4614425 | biostudies-literature

Contribution to the knowledge of Teloganodidae (Ephemeroptera, Ephemerelloidea) of India.

Not available

S-EPMC9848721 | biostudies-literature

Cytochrome c oxidase dysfunction enhances phagocytic function and osteoclast formation in macrophages.

Not available

S-EPMC6662975 | biostudies-literature

Hyperglycemia promotes microvillus membrane expression of DMT1 in intestinal epithelial cells in a PKCα-dependent manner.