Stable-protein pairs

Show results for

Unknown (282)
Proteomics (116)
Transcriptomics (111)
Genomics (45)
Metabolomics (7)
Other (3)

Organisms

Homo sapiens (77)
Mus musculus (16)
Drosophila melanogaster (9)
Streptomyces coelicolor (4)
Caenorhabditis elegans (4)
Saccharomyces cerevisiae (4)
Rattus norvegicus (3)
Arabidopsis thaliana (2)
Helicobacter pylori 26695 (1)
Tetrahymena thermophila (1)
Bacteroides fragilis NCTC 9343 (1)
Pimephales promelas (1)
Ostreococcus tauri (1)
Daphnia pulex (1)
Yarrowia lipolytica (1)
Bos indicus (1)
Bacillus amyloliquefaciens (1)
Aspergillus fumigatus (1)
Listeria monocytogenes (1)
Schizosaccharomyces pombe (1)
Aspergillus fumigatus Af293 (1)
Staphylococcus aureus (1)
Streptococcus pneumoniae (1)
Bos taurus (1)
Ovis aries (1)
Oryza sativa Japonica Group (1)
Escherichia coli K-12 (1)
Cryptococcus neoformans (1)
Actinoplanes sp. SE50/110 (1)
Danio rerio (1)

Organisms

Homo sapiens (5)
Mus musculus (3)
Saccharomyces cerevisiae (2)
Escherichia coli str. K-12 substr. MG1655 (1)
Rattus norvegicus (1)
Escherichia coli (1)

Repository

biostudies-arrayexpress (121)
pride (65)
PAXDB (41)
EGA (17)
ENA (16)
MetaboLights (7)
geo (5)
MassIVE (4)
iProX (2)
jPOST (2)
PanoramaPublic (2)

Tissue

Cell culture (21)
Brain (6)
Blood plasma (3)
Colon (3)
Kidney (3)
Feces (2)
Fibroblast (2)
Heart (2)
Ileum (2)
Jump-In-T-REx HEK293 cell (2)
Liver (2)
Myeloid suppressor cell (2)
Cell line cell (1)
Colon epithelial cell (1)
Dendritic cell (1)
Embryo (1)
Erythrocyte (1)
HEK-293 cell (1)
HeLa cell (1)
Leg muscle (1)
Lung (1)
Malignant cell (1)
Mammary gland epithelial cell (1)
Monocyte (1)
Osteoblast (1)
Ovary cancer cell (1)
Permanent cell line cell (1)
Photosynthetic cell (1)
Plant cell (1)
Retina (1)

Disease

Disease free (4)
Breast cancer (2)
Colon cancer (2)
Crohn's disease (2)
Inflammatory bowel disease (2)
Melanoma (2)
Persian gulf syndrome (2)
Ulcerative colitis (2)
Spinal muscular atrophy (1)
Infected (1)
Squamous Cell Carcinoma (1)
Breast carcinoma (invasive ductal) (1)
Gastric cancer (1)
Breast carcinoma (1)
Cardiovascular system disease (1)
Glioblastoma (1)
Malignant neoplasm of ovary (1)
Ovarian cancer (1)
Stomach cancer (1)
Visceral leishmaniasis (1)

Technology Type

Mass Spectrometry (65)
Shotgun proteomics (35)
Affinity purification coupled with mass spectrometry proteomics (13)
Bottom-up proteomics (8)
Mass spectrometry (5)
Gel-based experiment (5)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Data-dependent acquisition (3)
Mass spectrometry assay (2)
HDMSE (2)
Data-independent acquisition (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

NextSeq 500 (4)
Illumina HiSeq 2000 (3)
LTQ Orbitrap Velos (3)
NextSeq 550 (2)
Illumina HiSeq 2500 (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
KAPA EvoPrep Kit (1)
GenePix 4000B Microarray Scanner (1)
Ion Torrent S5 (1)
GenePix 4000A [Axon Instruments] (1)
G2565AA DNA microarray scanner [Agilent] (1)
Illumina Genome Analyzer IIx (1)
Axon- GenePix4000B (1)
Illumina Genome Analyzer II (1)
Illumina NovaSeq X (1)
Nanodrop (1)
Illumina MiSeq (1)
Illumina HiSeq 1500 (1)
Illumina HiSeq 4000 (1)
Thermo Scientific Orbitrap Velos 2 (1)
Xevo QTof MS (Waters) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2019 (40)
2010 (29)
2015 (18)
2014 (16)
2020 (14)
2024 (12)
2018 (11)
2012 (11)
2025 (11)
2016 (10)
2022 (10)
2026 (9)
2021 (9)
2023 (8)
2011 (8)
2008 (8)
2013 (6)
2009 (6)
2017 (5)
2006 (3)
2007 (1)
2005 (1)

UNIPROT ID/AC

1433B_HUMAN (29)
1433E_HUMAN (29)
1433F_HUMAN (29)
1433G_HUMAN (29)
1433S_HUMAN (29)
1433T_HUMAN (29)
1433Z_HUMAN (29)
2A5A_HUMAN (29)
2A5B_HUMAN (29)
2A5D_HUMAN (29)
2A5E_HUMAN (29)
2A5G_HUMAN (29)
2AAA_HUMAN (29)
2AAB_HUMAN (29)
2ABA_HUMAN (29)
2ABD_HUMAN (29)
3BP1_HUMAN (29)
3HAO_HUMAN (29)
3HIDH_HUMAN (29)
3MG_HUMAN (29)
41_HUMAN (29)
4EBP1_HUMAN (29)
4EBP2_HUMAN (29)
4F2_HUMAN (29)
5NT3A_HUMAN (29)
5NT3B_HUMAN (29)
5NTC_HUMAN (29)
5NTD_HUMAN (29)
6PGD_HUMAN (29)
6PGL_HUMAN (29)

CHEBI ID

CHEBI:543745 (1)
CHEBI:131775 (1)
CHEBI:17965 (1)
CHEBI:16514 (1)
CHEBI:27809 (1)
CHEBI:16547 (1)
CHEBI:74960 (1)
CHEBI:28281 (1)
CHEBI:16954 (1)
CHEBI:36281 (1)
CHEBI:18346 (1)
CHEBI:28238 (1)
CHEBI:32374 (1)
CHEBI:77065 (1)
CHEBI:42111 (1)
CHEBI:18237 (1)
CHEBI:7676 (1)
CHEBI:28044 (1)
CHEBI:16870 (1)
CHEBI:16856 (1)
CHEBI:76078 (1)
CHEBI:73024 (1)
CHEBI:17597 (1)
CHEBI:48131 (1)
CHEBI:16112 (1)
CHEBI:6650 (1)
CHEBI:17858 (1)
CHEBI:15891 (1)
CHEBI:16562 (1)
CHEBI:17620 (1)

Metabolite Name

Glutamic acid (3)
4-Aminobutyraldehyde (2)
4,6-Dihydroxyquinoline (2)
N-Methyl-D-aspartic acid (2)
L-2-Amino-3-methylenehexanoic acid (2)
4-Nitrophenol (2)
N1-Acetylspermidine (2)
1,2,3-Trihydroxybenzene (2)
Norfloxacin (2)
Diethanolamine (2)
Acetylglycine (2)
7-Methylguanine (2)
2-Methylbutyrylglycine (2)
Ornithine (2)
Vanillin (2)
L-Threonine (2)
Serotonin (2)
Caffeic acid (2)
Methionine (2)
Urocanic acid (2)
N-Acetylputrescine (2)
Indoleacrylic acid (2)
Butyrylcarnitine (2)
4-Guanidinobutanoic acid (2)
Thymine (2)
Proline (2)
Phenylalanine (2)
Glycerophosphocholine (2)
Tryptophan (2)
Hypoxanthine (2)

First Public Date

2019 (4)
2021 (3)
2026 (2)
2025 (2)
2020 (1)
2016 (1)
2015 (1)
2014 (1)
2013 (1)

Classification

bacteria (2)

Modification

2x(15)N labeled L-lysine (1)
4 (1)
4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (47)
RNA-seq of coding RNA (17)
Comparative genomic hybridization by array (11)
ChIP-seq (9)
Unknown experiment type (7)
Other (7)
CUT&RUN (5)
ChIP-chip by array (4)
RNA-seq of non coding RNA (4)
RIP-seq (2)
Methylation profiling by array (2)
ChIP-chip by tiling array (1)
RNAi profiling by array (1)
Genotyping by array (1)
MicroRNA profiling by array (1)
DNA-seq (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2010 (38)
2019 (30)
2014 (30)
2023 (25)
2015 (25)
2025 (24)
2022 (21)
2021 (21)
2024 (19)
2011 (18)
2020 (18)
2009 (17)
2012 (15)
2008 (14)
2016 (13)
2013 (13)
2018 (12)
2017 (11)
2006 (11)
2007 (10)
2026 (8)
2005 (3)
2002 (3)
2003 (2)
2004 (1)
2001 (1)

Lab affiliation

UMR 7367 CNRS-UL IMoPA Biopôle de l'Université de Lorraine Campus Brabois-Santé 9 avenue de la forêt de Haye 54505 Vandoeuvre-les-Nancy FRANCE (7)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany (4)
Department of Systems Immunology, Weizmann Institute of Science, Rehovot, Israel (2)
*Dr. Arun Sharma Protein Biochemistry and Structural Biology Division National Institute of Malaria Research (ICMR) Department of Health Research, Ministry of Health and Family Welfare, Govt. of India Sector-8, Dwarka, New Delhi- 110077 (1)
1. Laboratory of Protein and Peptide Pharmaceuticals & Laboratory of Proteomics, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China 2. University of Chinese Academy of Sciences, Beijing 100049, China (1)
Biomolecular Interactions, Max Planck Institute for Developmental Biology, Tübingen, Germany; Applied Bioinformatics, Dept. of Computer Science, University of Tübingen, Germany; Quantitative Biology Center (QBiC), University of Tübingen, Germany; Institute for Translational Bioinformatics, University Hospital Tübingen, Germany; Institute for Bioinformatics and Medical Informatics, University of Tübingen, Germany; (1)
Biomolecular Mass Spectrometry Pharmaceutical Sciences Utrecht University (1)
Cancer Science Institute of Singapore, National University of Singapore (1)
Center for Genomics and Systems Biology Department of Biology New York University, New York, NY, 10003, USA (1)
Center for Interactions of Proteins in Epithelial Transport, Department of Biomedicine, Aarhus University (1)
Chair of Microbial Bioenergetics and Bioengineering Institute of Integrative Biology, University of Liverpool,Crown Street, Liverpool L69 7ZB, United Kingdom (1)
Chief, Section of Research and Tissue Engineering, Department of Plastic Surgery, University Medical Center Freiburg, Germany (1)
Department of Biochemistry 1, Theodor Boveri-Institute, University of Würzburg, Am Hubland, 97074 Würzburg, Germany (1)
Department of Biochemistry and Molecular Biology College of Medicine, National Taiwan University, Taipei, Taiwan (1)
Department of Biology, University of Rochester (1)
Department of Chemistry, National Cheng Kung University, Taiwan (1)
Department of Clinical Dentistry, UiT - The Arctic University of Norway, Tromsø, Norway (1)
Department of Developmental and Molecular Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA (1)
Department of Pharmacodynamics, University of Florida (1)
Department of Plant Physiology, University of Rostock, Einsteinstr. 3, D-18059 Rostock, Germany (1)
Division of Life Science, The Hong Kong University of Science and Technology (1)
Dr.Eitan Lerner's lab, The Department of Biological Chemistry The Alexander Silberman Institute for Life Sciences, The Hebrew University of Jerusalem ISRAEL (1)
Drug Discovery Unit, Wellcome Centre for Anti-Infectives Research, Division of Biological Chemistry and Drug Discovery, School of Life Sciences, University of Dundee, Dundee, United Kingdom (1)
Functional Proteomics Lab, Faculty of Biology, University of Freiburg, Germany (1)
Functional Proteomics Laboratory - Department of Science and Technology, Federal University of Sao Paulo (UNIFESP), Sao Jose dos Campos, Sao Paulo, Brazil (1)
Genetics Unit, Department of Biomedical Sciences, Faculty of Medicine, Casanova 143, 08036 Barcelona, Spain (1)
Head of Laboratory of Neuro-Oncology, Erasmus MC, Rotterdam (1)
Institut de recherches cliniques de Montréal (IRCM), Translational proteomics (1)
Institute of Science and Technology Austria, Am Campus 1, 3400 Klosterneuburg, Austria (1)
Korea Institute of Science and Technology (1)

Previous page
1 / 57
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 57
Next page

Sort by:

Relevance

Page size

Stable-protein Pair Analysis as A Novel Strategy to Identify Proteomic Signatures: Application to Seminal Plasma From Infertile Patients.

Our aim was to define seminal plasma proteome signatures of infertile patients categorized according to their seminal parameters using TMT-LC-MS/MS. To that extent, quantitative proteomic data was analyzed following two complementary strategies: (i) the conventional approach based on standard statis...

ORGANISM(S): Homo sapiens (Human)

2019-02-25 | PXD010579 | Pride

Stable-protein Pair Analysis as A Novel Strategy to Identify Proteomic Signatures: Application To Seminal Plasma From Infertile Patients.

Not available

S-EPMC6427235 | biostudies-literature

Reversibly locked thionucleobase pairs in DNA to study base flipping enzymes.

Not available

S-EPMC4187101 | biostudies-literature

Isolation of receptor-ligand pairs by capture of long-lived multivalent interaction complexes.

Not available

S-EPMC124300 | biostudies-literature

S phase-specific proteolytic cleavage is required to activate stable DNA binding by the CDP/Cut homeodomain protein.

Not available

S-EPMC87367 | biostudies-literature

Contributions of aromatic pairs to the folding and stability of long-lived human γD-crystallin.

Not available

S-EPMC3064831 | biostudies-literature

Transcriptomic profiling of PBDE-exposed HepaRG cells unveils critical lncRNA- PCG pairs involved in intermediary metabolism.

Not available

S-EPMC7043721 | biostudies-literature

MeDIP-chip from 3 pairs of gastric cancer and adjacent tissues

Methylated modifications of genome are common events in carcinogenesis and is involved in the tumorigenesis and progression of various cancers including gastric cancer Methylated DNA immunoprecipitation (MeDIP) combined with a human miRNA tiling microarray analysis demonstrated that there are much m...

ORGANISM(S): Homo sapiens

2015-09-14 | E-GEOD-72979 | biostudies-arrayexpress

Conserved Topological Domains in Mammalian Genomes Identified by High-resolution Analysis of Chromatin Interactions

The spatial organization of the genome is intimately linked to its biological function, yet our understanding of higher order genomic structure is limited. Here we present high-resolution analyses of chromosomal organization in pluripotent and differentiated human and murine cell types determined u...

ORGANISM(S): Mus musculus

2012-04-10 | E-GEOD-35156 | biostudies-arrayexpress

Dissecting the contributions of β-hairpin tyrosine pairs to the folding and stability of long-lived human γD-crystallins.

Not available

S-EPMC3976203 | biostudies-literature

Previous page
1 / 57
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 57
Next page

Sort by:

Relevance

Page size

564 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

CHEBI ID

Metabolite Name

First Public Date

Classification

Modification

Study type

Release Date

Lab affiliation

Tags

OmicsDI is part of the ELIXIR infrastructure

Tweets