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UnknownBreaking free from references: a consensus-based approach for community profiling with long amplicon nanopore data.
Not available
S-EPMC11647271 | biostudies-literature
TranscriptomicsChIP-chip by array of human K562, U937 and CD14+ cells to identify histone modifcations in ENCODE regions
Chromatin immunoprecipitation microarray (ChIP-chip) study using 3 human cell lines (K562, U937, CD14+); of 19 histone modifications across 1% of the human genome used in the pilot phase of the ENCODE project.
paper abstract: It has recently been shown that nucleosome distribution, histone modifi...
ORGANISM(S): Homo sapiens 
2010-12-29 | E-MTAB-334 | biostudies-arrayexpress
TranscriptomicsMining the genome of Arabidopsis thaliana as a basis for the identification of novel bioactive peptides involved in oxidative stress tolerance
Although evidence accumulates on the role of plant peptides in the response to external conditions, the number of peptide-encoding genes in the genome is still underestimated. In order to identify novel oxidative stress-induced peptides in Arabidopsis thaliana a tiling array analysis (GeneChipM-BM-....
ORGANISM(S): Arabidopsis thaliana 
2013-08-31 | E-GEOD-49001 | biostudies-arrayexpress
TranscriptomicsBatch wt vs hyper +_- pABA Normal int_Filtered fg-bg2
Transcriptional analysis upon the overexpression of the folate gene cluster on a high copy plasmid when compared to an empty vector in the lactic acid bacterium L. plantarum. The transcriptional response was determined for both strains in the presence and absence of pABA thereby using the hybridisat...
ORGANISM(S): Lactobacillus plantarum 
2008-05-31 | E-GEOD-8956 | biostudies-arrayexpress
TranscriptomicsControl vs hyper; 25 mM glucose_Filtered fb-bg
Transcriptional analysis upon the overexpression of the folate gene cluster on a high copy plasmid when compared to an empty vector in the lactic acid bacterium L. plantarum. The transcriptional response was determined for both strains in continuous culture in the presence of glucose thereby using t...
ORGANISM(S): Lactobacillus plantarum 
2010-05-14 | E-GEOD-9392 | biostudies-arrayexpress
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