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TranscriptomicsAnalysis of ethanologenic E.coli strain GLBRCE1 during fermentation of alkaline-pretreated corn stover hydrolysate
The physiology of ethanologenic Escherichia coli grown anaerobically in alkaline-pretreated plant hydrolysates is not well studied. To gain insight into how E. coli responds to such hydrolysates, we studied an E. coli K-12 ethanologen fermenting a hydrolysate prepared from corn stover pre-treated by...
ORGANISM(S): Escherichia coli 
2012-06-17 | E-GEOD-35049 | biostudies-arrayexpress
TranscriptomicsAromatic inhibitors derived from ammonia-pretreated lignocellulose hinder bacterial ethanologenesis by activating regulatory circuits controlling inhibitor efflux and detoxification (II)
Efficient microbial conversion of lignocellulosic hydrolysates to biofuels is a key barrier to the economically viable deployment of lignocellulosic biofuels. A chief contributor to this barrier is the impact on microbial processes and energy metabolism of lignocellulose-derived inhibitors, includin...
ORGANISM(S): Escherichia coli 
2014-07-18 | E-GEOD-58902 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human healthy subjects, patients with Crohns Disease, and patients with Ulcerative Colitis to compare PBMCs in inflammatory bowel disease
Comparison of PBMC transcriptional profiles in healthy subjects, patients with Crohn's Disease, and patients with Ulcerative Colitis
ORGANISM(S): Homo sapiens 
2007-09-07 | E-GEOD-3365 | biostudies-arrayexpress
TranscriptomicsAromatic inhibitors derived from ammonia-pretreated lignocellulose hinder bacterial ethanologenesis by activating regulatory circuits controlling inhibitor efflux and detoxification (I)
Efficient microbial conversion of lignocellulosic hydrolysates to biofuels is a key barrier to the economically viable deployment of lignocellulosic biofuels. A chief contributor to this barrier is the impact on microbial processes and energy metabolism of lignocellulose-derived inhibitors, includin...
ORGANISM(S): Escherichia coli 
2014-07-18 | E-GEOD-58806 | biostudies-arrayexpress
TranscriptomicsAromatic inhibitors derived from ammonia-pretreated lignocellulose hinder bacterial ethanologenesis by activating regulatory circuits controlling inhibitor efflux and detoxification (IV)
Efficient microbial conversion of lignocellulosic hydrolysates to biofuels is a key barrier to the economically viable deployment of lignocellulosic biofuels. A chief contributor to this barrier is the impact on microbial processes and energy metabolism of lignocellulose-derived inhibitors, includin...
ORGANISM(S): Escherichia coli 
2014-07-18 | E-GEOD-58977 | biostudies-arrayexpress
TranscriptomicsAromatic inhibitors derived from ammonia-pretreated lignocellulose hinder bacterial ethanologenesis by activating regulatory circuits controlling inhibitor efflux and detoxification (V)
Efficient microbial conversion of lignocellulosic hydrolysates to biofuels is a key barrier to the economically viable deployment of lignocellulosic biofuels. A chief contributor to this barrier is the impact on microbial processes and energy metabolism of lignocellulose-derived inhibitors, includin...
ORGANISM(S): Escherichia coli 
2014-07-18 | E-GEOD-59397 | biostudies-arrayexpress
UnknownProbability of vertical HIV transmission: A systematic review and meta-regression.
Not available
S-EPMC11643157 | biostudies-literature
TranscriptomicsAromatic inhibitors derived from ammonia-pretreated lignocellulose hinder bacterial ethanologenesis by activating regulatory circuits controlling inhibitor efflux and detoxification (III)
Efficient microbial conversion of lignocellulosic hydrolysates to biofuels is a key barrier to the economically viable deployment of lignocellulosic biofuels. A chief contributor to this barrier is the impact on microbial processes and energy metabolism of lignocellulose-derived inhibitors, includin...
ORGANISM(S): Escherichia coli 
2014-07-18 | E-GEOD-58976 | biostudies-arrayexpress
TranscriptomicsGene expression data of cSHMT mutant, heterozygous, and wild-type mouse colons
Folate-mediated one-carbon metabolism is required for purine, thymidylate, and S-adenosylmethionine synthesis. Impairments in folate metabolism diminish cellular methylation potential and genome stability. Cytoplasmic serine hydroxymethyl transferase (cSHMT) regulates partitioning between thymidylat...
ORGANISM(S): Mus musculus 
2010-03-03 | E-GEOD-14645 | biostudies-arrayexpress
TranscriptomicsMthfd1 is a modifier of intestinal carcinogenesis
The metabolic pathways that underlie the association between folate deficiency and increased risk for colorectal cancer (CRC) remain unclear. We have studied the effect of C1THF synthase (encoded by the Mthfd1 gene) and dietary folate and choline on intestinal tumor development in Apcmin/+ mice and ...
ORGANISM(S): Mus musculus 
2010-03-20 | E-GEOD-15419 | biostudies-arrayexpress
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