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TranscriptomicsStromal gene expression in human esophageal cancer
The incidence of esophageal and junctional adenocarcinoma has increased 6 fold in the last 30 years and 5 year survival remains less than 14%. Once considered an inert scaffold, the stromal compartment is now recognized to play a central role in invasive cancer. However, whether the stroma plays a r...
ORGANISM(S): Homo sapiens 
2010-06-24 | E-GEOD-19632 | biostudies-arrayexpress
GenomicsscATACseq of sorted stromal cell compartment from patients with Crohn's disease
scATACseq of sorted stromal cell compartment from patients with Crohn's disease
PRJNA1322435 | ENA
GenomicsscRNAseq of sorted stromal cell compartment from patients with Crohn's disease
scRNAseq of sorted stromal cell compartment from patients with Crohn's disease
PRJNA1322427 | ENA
TranscriptomicsProgesterone-mediated gene expression in the human endometrial stromal compartment during the implantation window
Progesterone regulated genes in the endometrial stromal compartment were studied in proven fertile women using laser dissection capture microscopy followed by microarray. Endometrial biopsies were obtained from women before (control group, n=9) and after (study group, n=9) treatment with mifepriston...
ORGANISM(S): Homo sapiens 
2014-07-16 | E-GEOD-59447 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse stromal cell compartment, lineage negative, CD45 negative bone marrow cells from C57B/L6 and B6.SJL (Ly5.1) strains
Comparison of gene expression in the stromal cell compartment (Lineage negative, CD45 negative bone marrow cells) of C57B/L6 and B6.SJL (Ly5.1) mice. duplicate samples were analyzed per strain (two biological replicates) and each of the two samples was pooled from 5 mice
ORGANISM(S): Mus musculus 
2010-01-20 | E-TABM-829 | biostudies-arrayexpress
TranscriptomicsMetabolic reprogramming of stromal fibroblasts through p62-mTORC1 signaling promotes inflammation and tumorigenesis
The tumor microenvironment plays a critical role in cancer progression, but the precise mechanisms by which stromal cells influence the tumor epithelium are poorly understood. The signaling adapter p62 has been implicated as a positive regulator of epithelial tumorigenesis; however, its role in the ...
ORGANISM(S): Mus musculus 
2014-07-23 | E-GEOD-55587 | biostudies-arrayexpress
GenomicsA single cell transcriptome atlas of Human thymic stromal compartment
A single cell transcriptome atlas of Human thymic stromal compartment
PRJNA670375 | ENA
GenomicsAzacitidine Modulates the Mesenchymal Stromal Cell Compartment in Myelodysplastic Syndromes
Azacitidine Modulates the Mesenchymal Stromal Cell Compartment in Myelodysplastic Syndromes
PRJNA447430 | ENA
TranscriptomicsMesenchymal stromal cells isolated from bronchoalveolar lavage and digest parenchymal lung tissue
Stromal support is critical to the achievement of lung homeostasis and the maintenance of an effective epithelial barrier, and yet previous studies have found a positive association between the number of mesenchymal stromal cell populations (MSCs) isolated from the alveolar space and human diseases ...
ORGANISM(S): Homo sapiens 
2016-07-04 | E-GEOD-74284 | biostudies-arrayexpress
TranscriptomicsExpression data from Hh signaling-deficient OP9 stromal cells
In the bone marrow B cell development occurs in initimate and essential association with stromal cells. Known effects of stromal cells on B cell development have been shown to be mediated through direct contact and by soluble factors produced by stromal cells. Our findings suggest that cell-nonauto...
ORGANISM(S): Mus musculus 
2012-07-11 | E-GEOD-34421 | biostudies-arrayexpress
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