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Unknown
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Genomics
(1049)
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(1)
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(1)
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Escherichia coli str. K-12 substr. MG1655
(1)
Pseudomonas aeruginosa PA14
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Repository
ENA
(893)
geo
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biostudies-arrayexpress
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pride
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Tissue
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(13)
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Disease
Cervix carcinoma
(6)
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(4)
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(3)
Not Available
(3)
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(3)
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(2)
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(1)
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(1)
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(1)
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(1)
Non-CF
(1)
These mice have a relatively normal first wave of spermatogenesis but never become fertile. Older animals show increased apoptosis of germ cells, increasing in severity as germ cell stage advances.
(1)
Astrocytoma III
(1)
Parasitic infection
(1)
Acute leukemia
(1)
Alzheimer's disease
(1)
Brain glioblastoma multiforme
(1)
Brain glioma
(1)
Cachexia
(1)
Carcinoma
(1)
Cerebral malaria
(1)
Technology Type
Mass Spectrometry
(164)
Shotgun proteomics
(94)
Illumina
(35)
Bottom-up proteomics
(29)
Illumina HiSeq 2500 (ILLUMINA)
(21)
Mass spectrometry
(21)
Affinity purification coupled with mass spectrometry proteomics
(14)
Gel-based experiment
(14)
Chemical cross-linking coupled with mass spectrometry proteomics
(8)
Data-dependent acquisition
(7)
Data-independent acquisition
(7)
Top-down proteomics
(7)
SWATH MS
(6)
NMR spectroscopy
(4)
Mass spectrometry assay
(3)
ILLUMINA, Illumina HiSeq 2500, Illumina HiSeq 2500 (ILLUMINA)
(2)
Illumina HiSeq 2000
(2)
Illumina HiSeq 2000, ILLUMINA
(2)
Illumina, unknown
(1)
ILLUMINA, Illumina HiSeq 2500
(1)
Illumina HiSeq 2000, Illumina HiSeq 2500 (ILLUMINA), ILLUMINA, Illumina HiSeq 2500
(1)
ILLUMINA, Illumina HiSeq 2000, Illumina HiSeq 2500 (ILLUMINA)
(1)
Illumina HiSeq 2500 (ILLUMINA), Illumina HiSeq 2000, Illumina HiSeq 2500, ILLUMINA
(1)
ESI
(1)
All-ion fragmentation
(1)
HDMSE
(1)
MSE
(1)
Proteogenomics
(1)
SRM/MRM
(1)
Instrument Platform
NextSeq 500
(11)
Illumina HiSeq 2000
(11)
Illumina HiSeq 4000
(10)
Illumina HiSeq 2500
(8)
Illumina NovaSeq 6000
(5)
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(3)
Illumina HiScanSQ
(2)
Illumina NovaSeq X
(2)
-
(2)
Affymetrix GCS 3000
(1)
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(1)
Affymetrix Clariom™ S (400 Format)
(1)
Agilent TapeStation
(1)
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(1)
Axon GenePix4000B
(1)
MoFlo Legacy cell sorter (Beckman Coulter)
(1)
PC
(1)
HiSeq X Five
(1)
Dell PowerEdge R820
(1)
Agilent Technologies Scanner G2505C
(1)
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(1)
Unix
(1)
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(1)
G2505A DNA microarray scanner [Agilent]
(1)
G2565BA DNA microarray scanner [Agilent]
(1)
Ion Torrent PGM
(1)
None
(1)
HiSeq X Ten
(1)
Illumina HiSeq 3000
(1)
6520A Quadrupole Time-of-Flight LC/MS
(1)
Publication Date
2023
(326)
2020
(153)
2013
(118)
2015
(109)
2025
(86)
2022
(85)
2021
(84)
2014
(82)
2011
(75)
2012
(73)
2010
(70)
2024
(64)
2016
(61)
2026
(47)
2019
(47)
2018
(46)
2008
(36)
2017
(29)
2009
(28)
2007
(23)
2006
(17)
2005
(8)
2004
(5)
2003
(1)
UNIPROT ID/AC
B2CT00
(2)
Q9FGX2
(2)
Q0WV96
(2)
Q9FDW1
(2)
Q9SUS1
(2)
Q8VWJ2
(2)
Q93WY4
(2)
Q9SZP1
(2)
Q8S8P5
(2)
Q39028
(2)
Q9SI37
(2)
Q39026
(2)
P31152
(2)
H9D0Z7
(2)
Q39023
(2)
Q13163
(2)
Q9S7U9
(2)
Q9C5H5
(2)
C0LGN2
(2)
O04609
(2)
O22921
(2)
P45985
(2)
Q02750
(2)
Q13233
(2)
Q30201
(1)
Q9UP52
(1)
P09601
(1)
P81172
(1)
Q9FL26
(1)
Q94A06
(1)
CHEBI ID
CHEBI:17368
(13)
CHEBI:16919
(10)
CHEBI:30769
(10)
CHEBI:15428
(9)
CHEBI:15741
(9)
CHEBI:15891
(9)
CHEBI:16856
(8)
CHEBI:16708
(8)
CHEBI:16704
(8)
CHEBI:15603
(8)
CHEBI:15422
(7)
CHEBI:16761
(7)
CHEBI:30805
(7)
CHEBI:17858
(7)
CHEBI:17724
(7)
CHEBI:17562
(7)
CHEBI:16977
(7)
CHEBI:82594
(2)
CHEBI:192761
(2)
CHEBI:46195
(2)
CHEBI:29033
(2)
CHEBI:26710
(1)
CHEBI:32635
(1)
CHEBI:32636
(1)
CHEBI:32639
(1)
CHEBI:29132
(1)
CHEBI:18153
(1)
CHEBI:26523
(1)
CHEBI:36080
(1)
CHEBI:16240
(1)
Metabolite Name
Glycine
(7)
L-Leucine
(7)
D-Glucose
(6)
L-Threonine
(6)
L-Glutamine
(6)
Creatine
(6)
Hypoxanthine
(6)
Ethanolamine
(5)
L-Alanine
(5)
Pyroglutamic acid
(5)
L-Histidine
(5)
Taurine
(5)
Cytidine
(5)
Creatinine
(5)
Uracil
(4)
Thymine
(4)
Sphingosine
(4)
Glutathione
(4)
L-Proline
(4)
L-Asparagine
(4)
Pyridoxine
(4)
Nicotinamide
(4)
Choline
(4)
Isocitric acid
(4)
Spermidine
(4)
Guanine
(4)
Cytosine
(4)
Alanine
(4)
Proline
(4)
Phenylalanine
(4)
First Public Date
2023
(306)
2020
(128)
2014
(94)
2025
(62)
2024
(53)
2022
(51)
2026
(41)
2021
(39)
2015
(32)
2019
(24)
2018
(20)
2017
(17)
2013
(14)
2016
(9)
2011
(3)
Modelling Approach
Ordinary differential equation model
(6)
Differential equation model
(2)
Mathematical model
(1)
Physiologically based pharmacokinetic model
(1)
Lab affiliation
Principal Investigator Centre for Targeted Protein Degradation, School of Life Sciences
(4)
Signalling ISP, Babraham Institute, Cambridge, UK
(3)
Associate Professor of Systems Biology Department of Molecular Medicine University of Pavia 9, via A Ferrata/ 27100 Pavia / Italy
(2)
CeMM - Research Center for Molecular Medicine of the Austrian Academy of Sciences
(2)
Dalian Institute of Chemical Physics, Chinese Academy of Sciences
(2)
Department of Structural Biology, Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP)
(2)
Institute of Bioinformatics, Bangalore - 560066, India
(2)
Laboratoire de Spectrométrie de Masse BioOrganique, Université de Strasbourg, CNRS, IPHC, UMR 7178, Strasbourg, France
(2)
Principal Investigator Centre for Targeted Protein Degradation
(2)
Principal Investigator • Centre for Targeted Protein Degradation
(2)
University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry
(2)
Universitätsklinikum Frankfurt am Main, Institut für Biochemie II
(2)
Assistant Professor, Biochemistry department, Central University of Rajasthan, NH-8, Bandar Sindri, Dist-Ajmer-305817, Rajasthan (INDIA)
(1)
BIOTECHNOLOGY DIVISION, CSIR-IHBT, PO BOX 6,PALAMPUR, HP, INDIA, 176061
(1)
Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany Wellcome Centre for Cell Biology, University of Edinburgh, Max Born Crescent, Edinburgh, EH9 3BF, UK
(1)
Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany Wellcome Centre for Cell Biology, University of Edinburgh, Max Born Crescent, Edinburgh, EH9 3BF, UK
(1)
Biotechnology, Applied Sciences, Delft University of Technology
(1)
Brazilian Biosciences National Laboratory (LNBio), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, Sao Paulo, Brazil, Zip Code 13083-970
(1)
CRBM, CNRS, Univ. Montpellier, F-34000, Montpellier France. Equipe labellisée Ligue Contre le Cancer, CRBM, CNRS, Univ. Montpellier, F-34000, Montpellier France.
(1)
CSIR-CCMB
(1)
Cedars-Sinai Medical Center, Heart Institute Advanced Clinical Biosystems Research Institute
(1)
Cell Biology of Bacterial Infections, IBMC, i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Portugal
(1)
Cell Biology, Harvard Medical School, Boston, MA, USA
(1)
Cell Biology, Harvard Medical School, USA
(1)
Cellular Signaling and Nuclear Dynamics Program, Institut de Génétique et de Biologie Moléculaire et Cellulaire, UMR 7104, INSERM U964, 1 rue Laurent Fries, 67404 Illkirch, France.
(1)
Center for Physiology and Pathophysiology, Institute of Vegetative Physiology, University of Köln, Köln, Germany Cologne Excellence Cluster on Cellular Stress Responses in Aging-associated Diseases (CECAD), University of Cologne, Cologne, Germany (lab head)
(1)
Chinese Academy of Sciences, Guangzhou
(1)
College of Life Sciences, Zhejiang University, China
(1)
Computational and Experimental Biology Group, CHRONIC DISEASES RESEARCH CENTER, NOVA Medical School - Universidade Nova de Lisboa, Lisboa, Portugal ( lab head )
(1)
Departamento de Biología Molecular y Biotecnología, Instituto de Investigaciones Biomédicas, Universidad Nacional Autónoma de México, Cd. Universitaria, Coyoacán, Ciudad de México, México
(1)
Tags
xref:PubMed:34616061
(94)
xref:PubMed:16751342
(14)
pathogen
(14)
pathogen:bacterium
(10)
xref:PubMed:40997217
(6)
xref:PubMed:38104314
(5)
xref:PubMed:38260455
(5)
xref:PubMed:36070798
(4)
xref:PubMed:38790076
(4)
xref:PubMed:32460028
(4)
xref:PubMed:39774647
(4)
xref:PubMed:26268215
(4)
xref:PubMed:16273092
(4)
xref:PubMed:34616062
(4)
xref:PubMed:36509758
(3)
xref:PubMed:29706549
(3)
xref:PubMed:37823593
(3)
xref:PubMed:27499876
(3)
xref:PubMed:25320245
(3)
xref:PubMed:23622250
(3)
xref:PubMed:17449903
(3)
xref:PubMed:38918616
(3)
xref:PubMed:18160043
(3)
xref:PubMed:35948630
(2)
xref:PubMed:32432919
(2)
xref:PubMed:42156391
(2)
xref:PubMed:36646931
(2)
xref:PubMed:39147413
(2)
xref:PubMed:35179962
(2)
xref:PubMed:37821702
(2)
IsPrivate
False
(10)
Submitter Keywords
Immuno-oncology
(1)
Classification
bacteria
(10)
fungi
(2)
protozoa
(2)
Modification
15.994915
(2)
4-tetrahydrothiazine-3-carboxylic acid
(2)
144.102062
(1)
2x(15)N labeled L-lysine
(1)
45.987721
(1)
4x(15)N labeled L-arginine
(1)
57.021464
(1)
Study type
Transcription profiling by array
(387)
RNA-seq of coding RNA
(82)
ChIP-seq
(22)
Comparative genomic hybridization by array
(19)
RNA-seq of non coding RNA
(14)
Other
(10)
Methylation profiling by array
(8)
Unknown experiment type
(7)
Genotyping by array
(6)
Methylation profiling by high throughput sequencing
(6)
ChIP-chip by tiling array
(5)
Animal - High-throughput sequencing
(5)
ChIP-chip by array
(4)
Transcription profiling by RT-PCR
(4)
RNA-seq of total RNA
(4)
RNAi profiling by array
(3)
RNA-seq of coding RNA from single cells
(3)
Transcription profiling by SAGE
(2)
Human - High-throughput sequencing
(2)
Cell line - One-color microarray
(2)
High-throughput sequencing
(2)
Transcription profiling by tiling array
(2)
Cell line - Single-cell sequencing
(1)
Differential
(1)
Plant - High-throughput sequencing
(1)
Cell line - High-throughput sequencing
(1)
DNA-seq
(1)
Release Date
2022
(308)
2021
(305)
2023
(296)
2020
(285)
2019
(251)
2015
(225)
2024
(224)
2018
(221)
2016
(216)
2014
(200)
2025
(196)
2017
(189)
2013
(181)
2012
(159)
2011
(127)
2010
(121)
2009
(66)
2008
(59)
2026
(36)
2007
(34)
2006
(16)
2005
(10)
2004
(6)
2002
(2)
2003
(1)
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Multi-omics analysis delineates the distinct functions of sub-cellular acetyl-CoA pools in Toxoplasma gondii
Not available
ORGANISM(S):
Toxoplasma gondii
ST001304
|
MetabolomicsWorkbench
Cite
Center for Sub-Cellular Genomics
Center for Sub-Cellular Genomics
PRJNA671177
|
ENA
Cite
Center for Sub-Cellular Genomics
Center for Sub-Cellular Genomics
PRJNA671180
|
ENA
Cite
Center for Sub-Cellular Genomics
PRJNA578360
|
ENA
Cite
Sub-cellular System Drift Drives Mosaic Evolution of Mammalian Neurons.
PRJNA1504351
|
ENA
Cite
Movies of cellular and sub-cellular motion by digital holographic microscopy.
Not available
S-EPMC1448199
|
biostudies-literature
Cite
Comprehensive catalog of dendritically localized mRNA isoforms from sub-cellular sequencing of single mouse neurons
Comprehensive catalog of dendritically localized mRNA isoforms from sub-cellular sequencing of single mouse neurons
PRJNA475141
|
ENA
Cite
Mitochondrion-specific dendritic lipopeptide liposomes for targeted sub-cellular delivery.
Not available
S-EPMC8062597
|
biostudies-literature
Cite
A high-field cellular DNP-supported solid-state NMR approach to study proteins with sub-cellular specificity.
Not available
S-EPMC10510770
|
biostudies-literature
Cite
Proctor2011_ProteinHomeostasis_NormalCondition
This model is from the article: Modelling the Role of the Hsp70/Hsp90 System in the Maintenance of Protein Homeostasis Proctor CJ, Lorimer IAJ PLoS ONE2011; 6(7): e22038. doi:10.1371/journal.pone.0022038, Abstract: Neurodegeneration is a...
2024-09-02
|
BIOMD0000000344
|
BioModels
Cite
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