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MetabolomicsTranscriptomic and metabolomic changes in postharvest sugarbeet roots reveal widespread metabolic changes in storage and identify genes potentially responsible for respiratory sucrose loss
Endogenous metabolism is primarily responsible for losses in sucrose content and processing quality in postharvest sugarbeet roots. The genes responsible for this metabolism and the transcriptional changes that regulate it, however, are largely unknown. To identify genes and metabolic pathways that ...
2024-05-15 | MTBLS1106 | MetaboLights
TranscriptomicsRibosome profiling on polysomes extracted via sucrose gradient and IP
Technical feasibility study to determine data quality and reproducibilty. Ribosome profiling was performed by either sucrose gradient (SG) or immunoprecipitation (IP). 1 sucrose gradient sample, 2 immunoprecipitation samples in two concentrations of beads
ORGANISM(S): Homo sapiens 
2016-02-17 | E-GEOD-74511 | biostudies-arrayexpress
ProteomicsEscherichia coli sucrose gradient fractionation
We studied localization of E. coli membrane proteome using sucrose gradient fractionation combined with quantitative MS.
ORGANISM(S): Escherichia coli 
2020-02-19 | PXD016403 | Pride
Escherichia coli 
OtherRibosome profiling on polysomes extracted via sucrose gradient and IP
Technical feasibility study to determine data quality and reproducibilty. Ribosome profiling was performed by either sucrose gradient (SG) or immunoprecipitation (IP).
ORGANISM(S): Homo sapiens 
2016-02-17 | GSE74511 | GEO
TranscriptomicsLocolization of circRNA with DIS3 WT or D146N mutant in sucrose density gradient centrifugation assay
To investigate the locolization between DIS3 and circRNA in fractions form sucrose density gradient centrifugation (SDGC) assay for 293T cells
ORGANISM(S): Homo sapiens 
2025-02-16 | GSE256498 | GEO
ProteomicsSucrose-induced proteomic response and carbohydrate utilization of Lactobacillus sakei TMW 1.411 during dextran formation
Lactobacillus (L.) sakei belongs to the dominating lactic acid bacteria in indigenous meat fermentations, while diverse strains of this species have also been isolated from plant fermentations. We could recently show, that L. sakei TMW 1.411 produces a high molecular weight dextran from sucrose, ind...
ORGANISM(S): Lactobacillus sakei 
2018-10-31 | PXD011417 | Pride
Metabolism Sucrose Proteomics Genomics Dextran Lactobacillus sakei 
ProteomicsLiving the sweet life: how Liquorilactobacillus hordei TMW 1.1822 changes its behavior in the presence of sucrose in comparison to glucose
Liquorilactobacillus (L.) hordei (formerly Lactobacillus hordei) is one of the dominating lactic acid bacteria within the water kefir consortium, being highly adapted to survive in this environment, while producing high molecular weight dextrans from sucrose. In this work, we extensively studied the...
ORGANISM(S): Lactobacillus hordei 
2021-01-07 | PXD020664 | Pride
Lactobacillus hordei Metabolism Sucrose Proteomics Liquorilactobacillus hordei Dextransucrase Water kefir Exoproteome 
TranscriptomicsThe Partitioning of RNAs in sperm
A diverse pool of RNAs remain encapsulated within the transcriptionally and translationally silent spermatozoon. These transcripts persist within the male gamete despite the dramatic reduction in cellular volume achieved through expulsion of the cytoplasm and quite possibly the nucleoplasm. The prec...
ORGANISM(S): Mus musculus 
2015-07-08 | E-GEOD-62874 | biostudies-arrayexpress
GenomicsLocolization of circRNA with DIS3 WT or D146N mutant in sucrose density gradient centrifugation assay
Locolization of circRNA with DIS3 WT or D146N mutant in sucrose density gradient centrifugation assay
PRJNA1079793 | ENA
TranscriptomicsCarbon starvation along the maize leaf gradient
gene expression profiling in different zones along the gradient of the growing maize leaf balde aover a time course of dirunal cycle and carbon starvation by extension of the night Plants assimilate carbon in their photosynthetic tissues in the light. However, carbon is required during the night, an...
ORGANISM(S): Zea mays 
2016-08-24 | E-GEOD-85963 | biostudies-arrayexpress
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