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TranscriptomicsNA-Seq reveals dynamic changes of gene expression in key stages of intestine regeneration in the sea cucumber Apostichopus japonicus.
Sea cucumbers (Holothuroidea; Echinodermata) have the capacity to regenerate lost tissues and organs.We used RNA-Seq to determine gene expression profiles associated with intestinal regeneration in A. japonicus at 3, 7, 14 and 21 days post evisceration (dpe) At least 15 individuals per stage, at 3,...
ORGANISM(S): Apostichopus japonicus 
2015-01-01 | E-GEOD-44995 | biostudies-arrayexpress
UnknownCrystal structure confirmation of JHP933 as a nucleotidyltransferase superfamily protein from Helicobacter pylori strain J99.
Not available
S-EPMC4125220 | biostudies-literature
ProteomicsComparative phosphoproteomic and acetylated proteomic analysis of intestine regeneration in the sea cucumber Apostichopus japonicus
Sea cucumbers have a striking capacity to regeneratemost of their viscera after evisceration, which has drawn theinterest ofmany researchers. In this study, we perform quantitative phosphoproteomics proteomic to analyze the proteinphosphorylation and acetylation changes between regenerative intestin...
ORGANISM(S): Stichopus japonicus (Sea cucumber) 
2018-10-22 | PXD008374 | Pride
Regeneration Sea cucumber Phosphoproteomic Acetylated proteomic Protein modified regulation 
TranscriptomicsA RNA-seq-based gene expression profiling of radiation-induced tumorigenic mammary epithelial cells
To understand tumorigenesis and cancer progression of mammary epithelium, we established a cell model combining over-expression of human telomerase reverse transcriptase gene (hTERT) and heavy-ion radiation from normal human mammary epithelial cells. We subsequently used RNA-seq method to acquire th...
ORGANISM(S): Homo sapiens 
2013-12-09 | E-GEOD-31310 | biostudies-arrayexpress
UnknownA multi-layered regulatory model uncovers the central role of OsPRR37 in coordinating multiple agronomic traits.
Not available
S-EPMC12831307 | biostudies-literature
UnknownBi-allelic mutation in Fsip1 impairs acrosome vesicle formation and attenuates flagellogenesis in mice.
Not available
S-EPMC8099781 | biostudies-literature
ProteomicsQuantitative exoproteomic analysis reveals a virulence-regulating mechanism by an AraC-like protein in Aeromonas hydrophila
Bacterial AraC is a transcription factor family that initiates transcription by recruiting RNA polymerase to the promoter. It also directly regulates various bacterial phenotypes. However, how this transcription factor regulates bacterial virulence and affects host immunity is still largely unknown....
ORGANISM(S): Aeromonas Hydrophila Subsp. Hydrophila Atcc 7966 
2023-03-21 | PXD040986 |
TranscriptomicsGene array data for Fas knock-out human cancer cell line and mouse liver tissue
CD95 (also called FAS and APO-1) is a prototypical death receptor that regulates tissue homeostasis mainly in the immune system through induction of apoptosis. During cancer progression CD95 is frequently downregulated or cells are rendered apoptosis resistant raising the possibility that loss of CD...
ORGANISM(S): Homo sapiens 
2010-04-02 | E-GEOD-21154 | biostudies-arrayexpress
UnknownSynthetic cleavage-resistant TREM2 boosts macrophage efferocytosis to treat inflammatory diseases.
Not available
S-EPMC12923966 | biostudies-literature
ProteomicsProteomics analysis reveals the importance of transcriptional regulator slyA in regulation of diverse physiological functions in Aeromonas hydrophila
Proteomics analysis reveals the importance of transcriptional regulator slyA in regulation of diverse physiological functions in Aeromonas hydrophila
ORGANISM(S): Aeromonas Hydrophila Subsp. Hydrophila Atcc 7966 
2022-10-27 | PXD023117 |
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