Sun Xiaofang X - OmicsDI

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Transcriptomics (3)
Unknown (1)
Metabolomics (1)
Proteomics (1)

Organisms

Homo sapiens (2)
Mus musculus (1)
Andrias davidianus (1)

Repository

biostudies-arrayexpress (3)
MetaboLights (1)
pride (1)

Tissue

Liver (1)

Disease

Osteocytes/osteoblasts (1)

Technology Type

Mass spectrometry (1)
Mass Spectrometry (1)
Shotgun proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2015 (1)
2014 (1)
2012 (1)
2025 (1)
2020 (1)

Metabolite Name

(-)-Catechin gallate (1)
(-)-Wikstromol (1)
(-)-trans-Carveol glucoside (1)
(12S,15S)-15-O-Demethyl-10,29-dideoxy-11,12-dihydro-striatin C (1)
(1xi,3xi)-1,2,3,4-Tetrahydro-1-methyl-beta-carboline-3-carboxylic acid (1)
(23S)-23,25-dihdroxy-24-oxovitamine D3 23-(beta-glucuronide) (1)
(24E)-3alpha-Acetoxy-15alpha-hydroxy-23-oxo-7,9(11),24-lanostatrien-26-oic acid (1)
(25R)-3beta,4beta-dihydroxycholest-5-en-26-oate(1-) (1)
(2S)-2-amino-3-[4-hydroxy-3-(sulfooxy)phenyl]-2-methylpropanoic acid (1)
(2xi,4xi)-4,4',5,7-Tetrahydroxyflavan (1)
(3a,5b,7a)-23-Carboxy-7-hydroxy-24-norcholan-3-yl-b-D-Glucopyranosiduronic acid (1)
(4E,7E,10Z,13E,16E,19E)-docosa-4,7,10,13,16,19-hexaenoic acid (1)
(S)-10,16-Dihydroxyhexadecanoic acid (1)
(S)-Isosclerone (1)
(Z)-4',6-Dihydroxyaurone 6-glucoside (1)
(Z)-4-Heptenal (1)
(¡À)-Catechin (1)
(¡À)-Naringenin (1)
(¡À)11-HEDE (1)
(¡À)12,13-DiHOME (1)
(¡À)13-HpODE (1)
(¡À)5,6-DHET (1)
(¡À)9-HpODE (1)
(¡À)alpha-CMBHC (1)
1,2,3,4,5,6-Hexahydro-7H-cyclopenta[b]pyridin-7-one (1)
1,2-dihydroxyheptadec-16-en-4-yl acetate (1)
1,4-Benzodioxin-2(3H)-one (1)
1,7-Dimethyluric acid (1)
1-(1-Pyrrolidinyl)-2-propanone (1)
1-(2,4-dihydroxy-5-methoxyphenyl)-2-(2,4,5-trihydroxyphenyl)propan-1-one (1)

Study type

Comparative genomic hybridization by array (2)
Transcription profiling by array (1)

Release Date

2015 (1)
2014 (1)
2012 (1)
2017 (1)

Lab affiliation

School of Laboratory Medicine, Xinxiang Medical University, Xinxiang, China (1)

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FY-hESC Micro-array raw data

Human embryonic stem cells (hESCs) exhibit a skewed X chromosome inactivation (XCI) have recently been reported. Whether there is any copy number variation (CNV), loss of heterozygousity (LOH) and single nucleotide variant (SNV) in those epigenetically distinct cells and whether these abnormalities ...

ORGANISM(S): Homo sapiens

2014-10-01 | E-MTAB-1992 | biostudies-arrayexpress

Chinese giant salamander liver LC-MS/MS

Chinese giant salamander Andrias davidianus has strong tolerance to starvation. Here, a high-throughput proteomic analysis was carried out on liver samples obtained from the A. davidianus after 3, 7 and 11 months of fasting.s a result, the expression levels of 364 proteins were significantly changed...

ORGANISM(S): Andrias davidianus

2020-01-17 | PXD014924 | Pride

Short-Term Clinical Response and Changes in the Fecal Microbiota and Metabolite Levels in Patients with Crohn's Disease After Stem Cell Infusions

Recent studies have shown a close relationship between the gut microbiota and Crohn's disease (CD). This study aimed to determine whether mesenchymal stem cell (MSC) treatment alters the gut microbiota and fecal metabolite pathways and to establish the relationship between the gut microbiota and fec...

2025-07-03 | MTBLS6288 | MetaboLights

Gene mRNA levels in the bone of FAM20C KO mice VS WT mice (3-WK-old)

Family with sequence similarity 20-member C (FAM20C) is a new molecule that is highly expressed in the mineralized tissues of mammals. Genetic studies showed that the loss-of-function mutations in FAM20C were associated with human lethal osteosclerotic bone dysplasia (Raine Syndrome), indicating tha...

ORGANISM(S): Mus musculus

2012-02-17 | E-MTAB-772 | biostudies-arrayexpress

Copy number variations independently induce autism spectrum disorder.

Not available

S-EPMC6434077 | biostudies-literature

Effects of Integrating and Non-integrating Reprogramming Methods on Copy Number Variation and Genomic Stability of Human Induced Pluripotent Stem Cells

Human-induced pluripotent stem cells (iPSCs) are derived from differentiated somatic cells using defined factors and provide a renewable source of autologous cells for cell therapy. Many reprogramming methods have been employed to generate human iPSCs, including the use of integrating vectors and no...